PF14354


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF14354, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF14354
Description Restriction alleviation protein Lar

Occurence in the database

PF14354 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2905 FBDBKF_13260 34298 34720 1 Restriction alleviation protein, Lar family Morganella morganii S1
1 group_2905 EHELCC_08835 240471 240893 -1 Restriction alleviation protein, Lar family Morganella morganii S2
2 group_2905 NLDBIP_09160 240471 240893 -1 Restriction alleviation protein, Lar family Morganella morganii S4
3 group_2905 LHKJJB_05105 16266 16688 1 Restriction alleviation protein, Lar family Morganella morganii S3
4 group_2905 HKOGLL_05810 225062 225484 -1 Restriction alleviation protein, Lar family Morganella morganii S5
5 group_2905 F4V73_RS06210 1303684 1303875 -1 Lar family restriction alleviation protein Morganella psychrotolerans