Homologs in group_2905

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13260 FBDBKF_13260 37.9 Morganella morganii S1 - Restriction alleviation protein, Lar family
EHELCC_08835 EHELCC_08835 37.9 Morganella morganii S2 - Restriction alleviation protein, Lar family
NLDBIP_09160 NLDBIP_09160 37.9 Morganella morganii S4 - Restriction alleviation protein, Lar family
LHKJJB_05105 LHKJJB_05105 37.9 Morganella morganii S3 - Restriction alleviation protein, Lar family
HKOGLL_05810 HKOGLL_05810 37.9 Morganella morganii S5 - Restriction alleviation protein, Lar family

Distribution of the homologs in the orthogroup group_2905

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2905

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P33229 1.48e-05 41 33 2 56 1 ralR Endodeoxyribonuclease toxin RalR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06210
Feature type CDS
Gene -
Product Lar family restriction alleviation protein
Location 1303684 - 1303875 (strand: -1)
Length 192 (nucleotides) / 63 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2905
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF14354 Restriction alleviation protein Lar

Protein Sequence

MTEKTQKLKPCPFCGCADITIHKPTYQDMTLFSIACDGCDVRIKRFNEPEAISAWNRRAPTGG

Flanking regions ( +/- flanking 50bp)

GCTGCCATATCAGACACCGGCACTACCACAACCACCGGAGGAGTGATGAAATGACAGAGAAAACACAGAAGCTAAAGCCATGCCCGTTTTGCGGATGCGCGGACATCACAATTCACAAGCCGACATATCAGGATATGACTCTGTTCAGTATTGCCTGTGACGGCTGCGATGTACGGATTAAGCGCTTTAACGAGCCGGAGGCAATTTCAGCCTGGAACCGGAGAGCACCAACAGGGGGTTAAATGCAAAAACAGACATTCCTACTCAGGAATGCGCGAATACTCAGCAATCT