Homologs in group_3398

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13260 FBDBKF_13260 100.0 Morganella morganii S1 - Restriction alleviation protein, Lar family
EHELCC_08835 EHELCC_08835 100.0 Morganella morganii S2 - Restriction alleviation protein, Lar family
NLDBIP_09160 NLDBIP_09160 100.0 Morganella morganii S4 - Restriction alleviation protein, Lar family
LHKJJB_05105 LHKJJB_05105 100.0 Morganella morganii S3 - Restriction alleviation protein, Lar family

Distribution of the homologs in the orthogroup group_3398

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3398

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_05810
Feature type CDS
Gene -
Product Restriction alleviation protein, Lar family
Location 225062 - 225484 (strand: -1)
Length 423 (nucleotides) / 140 (amino acids)
In genomic island GI77

Contig

Accession ZDB_682
Length 259781 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3398
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF14354 Restriction alleviation protein Lar

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19779 endodeoxyribonuclease RalR [EC:3.1.-.-] - -

Protein Sequence

METTKYAVTYLGNYPCGHRHALTITVTAQDADSAIEKAQEAFDDERITSTNHMLHAVVPVGFSTSMMAEVDMCPPRSEIELQPCPFCGNDDIKLNSTGWDGEYLYTVRCDCCGSSQPEDSLKTAVRVWNQREALQTAEVK

Flanking regions ( +/- flanking 50bp)

ACACGGCGTAGATCTGAAAAAACTCTTTGGTGTGAAGTGAGGTGATAAAAATGGAAACGACAAAATACGCAGTAACTTACCTGGGCAATTATCCGTGTGGCCACCGTCATGCCCTGACTATCACAGTGACGGCTCAGGATGCAGATTCGGCTATTGAAAAAGCGCAGGAAGCCTTTGATGACGAGCGGATCACCTCAACCAATCACATGCTTCATGCAGTCGTTCCGGTCGGGTTCAGTACCAGCATGATGGCTGAAGTCGATATGTGCCCGCCGCGCAGTGAGATTGAACTGCAACCCTGCCCTTTCTGCGGTAATGACGACATCAAGCTGAATAGTACTGGCTGGGATGGTGAATACCTGTATACCGTCCGCTGTGACTGCTGCGGTTCCAGTCAGCCTGAAGACTCTCTGAAAACTGCCGTGCGCGTATGGAATCAGCGTGAAGCCCTGCAAACAGCGGAGGTTAAATAATTATGAACTTTACTGATACCGGCAGTGGTGTCCTCTCTGACGACGGCACT