PF14246


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF14246, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF14246
Description AefR-like transcriptional repressor, C-terminal domain

Occurence in the database

PF14246 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2497 FBDBKF_01765 42512 43150 -1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA Morganella morganii S1
1 group_2497 EHELCC_02235 430332 430970 -1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA Morganella morganii S2
2 group_2497 NLDBIP_01225 249166 249804 1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA Morganella morganii S4
3 group_2497 LHKJJB_00810 142881 143519 -1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA Morganella morganii S3
4 group_2497 HKOGLL_00850 148392 149030 -1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA Morganella morganii S5
5 group_2497 F4V73_RS04095 866492 867127 -1 TetR/AcrR family transcriptional regulator Morganella psychrotolerans