PF14002


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF14002, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF14002
Description YniB-like protein

Occurence in the database

PF14002 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1818 FBDBKF_13470 72347 72886 -1 yniB YniB family protein Morganella morganii S1
1 group_1818 EHELCC_08625 202305 202844 1 yniB YniB family protein Morganella morganii S2
2 group_1818 NLDBIP_08950 202305 202844 1 yniB YniB family protein Morganella morganii S4
3 group_1818 LHKJJB_05315 54315 54854 -1 yniB YniB family protein Morganella morganii S3
4 group_1818 HKOGLL_05600 186896 187435 1 yniB YniB family protein Morganella morganii S5
5 group_1818 F4V73_RS03295 702963 703502 1 YniB family protein Morganella psychrotolerans
6 group_1818 PMI_RS04965 1087746 1088300 1 YniB family protein Proteus mirabilis HI4320