Homologs in group_1855

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13470 FBDBKF_13470 100.0 Morganella morganii S1 yniB YniB family protein
NLDBIP_08950 NLDBIP_08950 100.0 Morganella morganii S4 yniB YniB family protein
LHKJJB_05315 LHKJJB_05315 100.0 Morganella morganii S3 yniB YniB family protein
HKOGLL_05600 HKOGLL_05600 100.0 Morganella morganii S5 yniB YniB family protein
F4V73_RS03295 F4V73_RS03295 92.7 Morganella psychrotolerans - YniB family protein
PMI_RS04965 PMI_RS04965 52.0 Proteus mirabilis HI4320 - YniB family protein

Distribution of the homologs in the orthogroup group_1855

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1855

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q56956 7.62e-63 194 54 1 179 4 yfeE Putative YfeABCD regulator YfeE Yersinia pestis
P76208 5.84e-55 174 50 3 181 4 yniB Uncharacterized protein YniB Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_08625
Feature type CDS
Gene yniB
Product YniB family protein
Location 202305 - 202844 (strand: 1)
Length 540 (nucleotides) / 179 (amino acids)
In genomic island -

Contig

Accession ZDB_217
Length 250991 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1855
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF14002 YniB-like protein

Protein Sequence

MTLQQARWVAVFKRVAGWVVFIPALISTIVSLLKLAHQQSTGSDKINAVIGDFINVVTEMIRVNTPFLNTFWNNSPVPDKLLGFEGHNLSFLLIYILMFVGLALSASGIRMSRQVKFIRENIEDQAIIENARESGKTPADLIAKIRIPNHTIFRQIFVLYVLPVFIGAIAWFLIKFLNW

Flanking regions ( +/- flanking 50bp)

CCTGATTTCTGCGCTATGATTACAGGGAAAAAATCAAATGAGGAAAGCGCATGACGCTGCAACAGGCACGCTGGGTTGCTGTATTTAAACGGGTGGCAGGCTGGGTGGTTTTTATTCCGGCCCTGATCTCAACCATTGTTTCGTTACTGAAACTGGCTCATCAGCAGAGTACCGGCAGTGATAAAATTAATGCCGTTATCGGGGATTTTATCAATGTGGTGACGGAAATGATCCGTGTGAATACACCGTTCCTGAACACATTCTGGAATAACTCCCCTGTACCGGATAAATTACTCGGTTTTGAAGGTCACAATCTGAGTTTTTTACTGATTTATATCCTGATGTTTGTGGGGCTGGCGCTGAGTGCATCCGGTATCCGTATGTCCCGGCAGGTAAAATTTATCCGCGAGAATATTGAAGATCAGGCCATTATTGAAAATGCCAGAGAGAGCGGAAAAACACCGGCGGATTTAATCGCCAAAATACGTATTCCGAATCACACTATTTTCCGGCAAATTTTTGTGCTGTACGTGCTGCCGGTATTTATCGGCGCAATTGCGTGGTTCTTAATTAAGTTCCTTAACTGGTAAGCAGAACAGCCTGAATAAAAAATACCCCGCAGAGTCTCTGACGGGGTATT