Homologs in group_1818

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13470 FBDBKF_13470 52.0 Morganella morganii S1 yniB YniB family protein
EHELCC_08625 EHELCC_08625 52.0 Morganella morganii S2 yniB YniB family protein
NLDBIP_08950 NLDBIP_08950 52.0 Morganella morganii S4 yniB YniB family protein
LHKJJB_05315 LHKJJB_05315 52.0 Morganella morganii S3 yniB YniB family protein
HKOGLL_05600 HKOGLL_05600 52.0 Morganella morganii S5 yniB YniB family protein
F4V73_RS03295 F4V73_RS03295 50.8 Morganella psychrotolerans - YniB family protein

Distribution of the homologs in the orthogroup group_1818

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1818

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q56956 9.01e-62 192 49 1 179 4 yfeE Putative YfeABCD regulator YfeE Yersinia pestis
P76208 2.38e-56 178 48 2 180 4 yniB Uncharacterized protein YniB Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04965
Feature type CDS
Gene -
Product YniB family protein
Location 1087746 - 1088300 (strand: 1)
Length 555 (nucleotides) / 184 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1818
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF14002 YniB-like protein

Protein Sequence

MSEDKMSYQHAGIYAIVKRVIGWLIFIPAFISTTVSLIELAAMPRANGEGVNAVINDFFRVLAEMVQFNTPWLDFFWRHSPVPNTQIGFSQQNIIFFVIFFLMFIGLALSASGLRMYRQVKYLKENIQDQLIIERALKSGITAQELEQNIKLPRHTLFTQVMVLYISPIIVIAIGYFLLKFLGW

Flanking regions ( +/- flanking 50bp)

TATTAGCCGTTAATTAGATTAGGATATTTAGGTGCATATTGCCGAATTCTATGAGTGAGGACAAAATGAGTTATCAACATGCAGGAATATATGCCATTGTAAAACGTGTTATTGGTTGGCTTATTTTTATTCCTGCCTTTATTTCAACGACAGTTTCGTTGATTGAGTTAGCTGCGATGCCAAGAGCAAATGGCGAGGGTGTTAATGCTGTAATTAATGATTTTTTTCGAGTATTAGCAGAAATGGTACAATTTAACACCCCGTGGCTAGACTTTTTTTGGCGTCATTCTCCAGTACCTAACACTCAAATAGGTTTTAGCCAACAGAATATTATCTTCTTTGTGATCTTCTTTTTAATGTTTATTGGCTTAGCACTGAGTGCATCAGGGTTAAGAATGTATCGCCAAGTGAAATATTTAAAGGAAAATATTCAAGATCAACTAATTATTGAACGAGCACTAAAAAGTGGTATTACAGCGCAAGAGCTAGAGCAGAATATAAAATTGCCAAGACATACACTATTTACTCAAGTCATGGTGCTGTATATTTCACCTATTATTGTGATCGCAATTGGTTATTTTCTGCTGAAATTTTTAGGCTGGTAGTTATCTATCACATTGACTTAATTAAAATAAACCTCGCAGGATAACATTTG