PF13616


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13616, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13616
Description PPIC-type PPIASE domain

Occurence in the database

PF13616 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1099 FBDBKF_06255 84225 85523 1 surA peptidylprolyl isomerase SurA Morganella morganii S1
1 group_1099 EHELCC_09300 84797 86095 1 surA peptidylprolyl isomerase SurA Morganella morganii S2
2 group_1099 NLDBIP_09680 84797 86095 1 surA peptidylprolyl isomerase SurA Morganella morganii S4
3 group_1099 LHKJJB_08075 131143 132441 -1 surA peptidylprolyl isomerase SurA Morganella morganii S3
4 group_1099 HKOGLL_07625 131143 132441 -1 surA peptidylprolyl isomerase SurA Morganella morganii S5
5 group_1099 F4V73_RS15665 128566 129864 -1 surA peptidylprolyl isomerase SurA Morganella psychrotolerans
6 group_1099 PMI_RS11535 2544917 2546254 1 surA peptidylprolyl isomerase SurA Proteus mirabilis HI4320