PF13242


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13242, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13242
Description HAD-hyrolase-like

Occurence in the database

PF13242 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1040 FBDBKF_05880 274 855 -1 gmhB D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase Morganella morganii S1
1 group_1197 FBDBKF_06915 47317 48384 -1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella morganii S1
2 group_1197 EHELCC_04055 137802 138869 1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella morganii S2
3 group_1040 EHELCC_08925 846 1427 -1 gmhB D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase Morganella morganii S2
4 group_1197 NLDBIP_04055 137598 138665 1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella morganii S4
5 group_1040 NLDBIP_09305 846 1427 -1 gmhB D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase Morganella morganii S4
6 group_1040 LHKJJB_08450 215811 216392 1 gmhB D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase Morganella morganii S3
7 group_1197 LHKJJB_09885 137712 138779 1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella morganii S3
8 group_1040 HKOGLL_08000 215811 216392 1 gmhB D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase Morganella morganii S5
9 group_1197 HKOGLL_09090 52273 53340 -1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella morganii S5
10 group_1197 F4V73_RS01100 232248 233315 -1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella psychrotolerans
11 group_1040 F4V73_RS16015 212598 213152 1 gmhB D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase Morganella psychrotolerans
12 group_1197 PMI_RS03260 719743 720810 -1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Proteus mirabilis HI4320
13 group_1040 PMI_RS11150 2454438 2455004 -1 gmhB D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase Proteus mirabilis HI4320