Orthogroup:group_1107


Homologs in group_1107

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06310 FBDBKF_06310 Morganella morganii S1 parE DNA topoisomerase 4 subunit B
EHELCC_09355 EHELCC_09355 Morganella morganii S2 parE DNA topoisomerase 4 subunit B
NLDBIP_09735 NLDBIP_09735 Morganella morganii S4 parE DNA topoisomerase 4 subunit B
LHKJJB_08020 LHKJJB_08020 Morganella morganii S3 parE DNA topoisomerase 4 subunit B
HKOGLL_07570 HKOGLL_07570 Morganella morganii S5 parE DNA topoisomerase 4 subunit B
F4V73_RS15610 F4V73_RS15610 Morganella psychrotolerans parE DNA topoisomerase IV subunit B
PMI_RS11600 PMI_RS11600 Proteus mirabilis HI4320 parE DNA topoisomerase IV subunit B

Distribution of group_1107 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1107 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1107

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1107.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 parE 7

Product

# Product Occurence
1 DNA topoisomerase 4 subunit B 5
2 DNA topoisomerase IV subunit B 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0187 7 L Replication, recombination and repair (L) DNA gyrase/topoisomerase IV, subunit B

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02622 7 topoisomerase IV subunit B [EC:5.6.2.2] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00204 7 DNA gyrase B
PF00986 7 DNA gyrase B subunit, carboxyl terminus
PF01751 7 Toprim domain
PF02518 7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

Annotations of the 174 SwissProt hits

Annotation Number of occurrences
Antibiotic resistant DNA gyrase subunit B 1
DNA gyrase subunit B 76
DNA gyrase subunit B (Fragment) 18
DNA gyrase subunit B (Fragments) 5
DNA gyrase subunit B, chloroplastic 1
DNA gyrase subunit B, chloroplastic/mitochondrial 2
DNA gyrase subunit B, mitochondrial 1
DNA gyrase subunit B, novobiocin-resistant 1
DNA gyrase subunit B, novobiocin-sensitive 1
DNA topoisomerase 2 18
DNA topoisomerase 2 top-2 1
DNA topoisomerase 2, mitochondrial 1
DNA topoisomerase 2-alpha 6
DNA topoisomerase 2-beta 4
DNA topoisomerase 4 subunit B 31
DNA topoisomerase large subunit 1
DNA topoisomerase small subunit 1
DNA topoisomerase-like protein cin-4 1
Probable DNA topoisomerase 2 1
Putative DNA topoisomerase 2, mitochondrial 1
Topoisomerase subunit TopoN 1
Type 2 topoisomerase subunit B 1

Protein length

Unique protein length 631

Protein length distribution