PF12710


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF12710, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF12710
Description haloacid dehalogenase-like hydrolase

Occurence in the database

PF12710 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2553 FBDBKF_02565 211415 212245 -1 HAD phosphoserine phosphatase-like hydrolase, family IB Morganella morganii S1
1 group_2297 FBDBKF_17645 25915 26589 -1 serB Phosphoserine phosphatase Morganella morganii S1
2 group_2332 FBDBKF_18290 22824 23579 -1 serB Phosphoserine phosphatase Morganella morganii S1
3 group_2553 EHELCC_03035 599235 600065 -1 HAD phosphoserine phosphatase-like hydrolase, family IB Morganella morganii S2
4 group_2297 EHELCC_18130 25291 25965 -1 serB Phosphoserine phosphatase Morganella morganii S2
5 group_2332 EHELCC_18325 22697 23452 -1 serB Phosphoserine phosphatase Morganella morganii S2
6 group_2553 NLDBIP_00425 80071 80901 1 HAD phosphoserine phosphatase-like hydrolase, family IB Morganella morganii S4
7 group_2297 NLDBIP_18020 12772 13446 1 serB Phosphoserine phosphatase Morganella morganii S4
8 group_2332 NLDBIP_18250 22898 23653 -1 serB Phosphoserine phosphatase Morganella morganii S4
9 group_2553 LHKJJB_01610 311784 312614 -1 HAD phosphoserine phosphatase-like hydrolase, family IB Morganella morganii S3
10 group_2297 LHKJJB_18215 12772 13446 1 serB Phosphoserine phosphatase Morganella morganii S3
11 group_2332 LHKJJB_18445 22736 23491 -1 serB Phosphoserine phosphatase Morganella morganii S3
12 group_2553 HKOGLL_01650 317295 318125 -1 HAD phosphoserine phosphatase-like hydrolase, family IB Morganella morganii S5
13 group_2297 HKOGLL_17985 25291 25965 -1 serB Phosphoserine phosphatase Morganella morganii S5
14 group_2332 HKOGLL_18180 22714 23469 -1 serB Phosphoserine phosphatase Morganella morganii S5
15 group_2332 F4V73_RS01805 396480 397142 -1 HAD family hydrolase Morganella psychrotolerans
16 group_2553 F4V73_RS04995 1064150 1064980 -1 HAD family hydrolase Morganella psychrotolerans
17 group_2297 F4V73_RS15025 244575 245243 -1 HAD family hydrolase Morganella psychrotolerans
18 group_1153 F4V73_RS15340 51537 52514 1 serB phosphoserine phosphatase Morganella psychrotolerans
19 group_2332 PMI_RS11785 2606971 2607651 1 HAD family hydrolase Proteus mirabilis HI4320
20 group_2297 PMI_RS13710 3045740 3046420 1 HAD family hydrolase Proteus mirabilis HI4320