PF12697


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF12697, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF12697
Description Alpha/beta hydrolase family

Occurence in the database

PF12697 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_327 FBDBKF_09885 73571 74350 1 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase MenH and related esterases, alpha/beta hydrolase fold Morganella morganii S1
1 group_1883 FBDBKF_14080 8389 9162 -1 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase Morganella morganii S1
2 group_327 EHELCC_04685 265536 266315 1 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase MenH and related esterases, alpha/beta hydrolase fold Morganella morganii S2
3 group_1883 EHELCC_08200 107823 108596 1 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase Morganella morganii S2
4 group_327 NLDBIP_04685 265332 266111 1 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase MenH and related esterases, alpha/beta hydrolase fold Morganella morganii S4
5 group_1883 NLDBIP_08525 107823 108596 1 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase Morganella morganii S4
6 group_1883 LHKJJB_05740 148563 149336 -1 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase Morganella morganii S3
7 group_327 LHKJJB_13945 69267 70046 -1 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase MenH and related esterases, alpha/beta hydrolase fold Morganella morganii S3
8 group_1883 HKOGLL_05175 92414 93187 1 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase Morganella morganii S5
9 group_327 HKOGLL_12590 74352 75131 1 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase MenH and related esterases, alpha/beta hydrolase fold Morganella morganii S5
10 group_327 F4V73_RS00465 98271 99050 -1 alpha/beta fold hydrolase Morganella psychrotolerans
11 group_1883 F4V73_RS02855 605265 606050 1 menH 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase Morganella psychrotolerans
12 group_687 F4V73_RS05250 1118059 1119123 1 alpha/beta fold hydrolase Morganella psychrotolerans
13 group_1883 PMI_RS08560 1866777 1867544 -1 menH 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase Proteus mirabilis HI4320