PF11741


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11741, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11741
Description AMIN domain

Occurence in the database

PF11741 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1080 FBDBKF_06140 48869 50119 -1 amiC N-acetylmuramoyl-L-alanine amidase AmiC Morganella morganii S1
1 group_1362 FBDBKF_08440 67255 68562 1 amiC N-acetylmuramoyl-L-alanine amidase Morganella morganii S1
2 group_1080 EHELCC_09185 49441 50691 -1 amiC N-acetylmuramoyl-L-alanine amidase AmiC Morganella morganii S2
3 group_1362 EHELCC_13085 95163 96470 -1 amiC N-acetylmuramoyl-L-alanine amidase Morganella morganii S2
4 group_1080 NLDBIP_09565 49441 50691 -1 amiC N-acetylmuramoyl-L-alanine amidase AmiC Morganella morganii S4
5 group_1362 NLDBIP_13425 95163 96470 -1 amiC N-acetylmuramoyl-L-alanine amidase Morganella morganii S4
6 group_1080 LHKJJB_08190 166547 167797 1 amiC N-acetylmuramoyl-L-alanine amidase AmiC Morganella morganii S3
7 group_1362 LHKJJB_13130 65973 67280 1 amiC N-acetylmuramoyl-L-alanine amidase Morganella morganii S3
8 group_1080 HKOGLL_07740 166547 167797 1 amiC N-acetylmuramoyl-L-alanine amidase AmiC Morganella morganii S5
9 group_1362 HKOGLL_11900 95163 96470 -1 amiC N-acetylmuramoyl-L-alanine amidase Morganella morganii S5
10 group_1362 F4V73_RS09660 33539 34774 1 N-acetylmuramoyl-L-alanine amidase Morganella psychrotolerans
11 group_1080 F4V73_RS15775 164042 165292 1 amiC N-acetylmuramoyl-L-alanine amidase AmiC Morganella psychrotolerans
12 group_1080 PMI_RS11405 2506876 2508138 -1 amiC N-acetylmuramoyl-L-alanine amidase AmiC Proteus mirabilis HI4320