Homologs in group_1362

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08440 FBDBKF_08440 100.0 Morganella morganii S1 amiC N-acetylmuramoyl-L-alanine amidase
EHELCC_13085 EHELCC_13085 100.0 Morganella morganii S2 amiC N-acetylmuramoyl-L-alanine amidase
NLDBIP_13425 NLDBIP_13425 100.0 Morganella morganii S4 amiC N-acetylmuramoyl-L-alanine amidase
LHKJJB_13130 LHKJJB_13130 100.0 Morganella morganii S3 amiC N-acetylmuramoyl-L-alanine amidase
F4V73_RS09660 F4V73_RS09660 88.9 Morganella psychrotolerans - N-acetylmuramoyl-L-alanine amidase
PMI_RS16735 PMI_RS16735 59.5 Proteus mirabilis HI4320 - N-acetylmuramoyl-L-alanine amidase

Distribution of the homologs in the orthogroup group_1362

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1362

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P26365 5.51e-138 405 51 10 437 1 amiB N-acetylmuramoyl-L-alanine amidase AmiB Escherichia coli (strain K12)
P26366 5.21e-135 398 52 8 427 3 amiB N-acetylmuramoyl-L-alanine amidase AmiB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44493 5.4e-90 282 58 1 226 3 amiB Probable N-acetylmuramoyl-L-alanine amidase AmiB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57638 4.67e-58 193 42 2 230 3 amiB Putative N-acetylmuramoyl-L-alanine amidase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89A33 1.09e-54 184 39 2 224 3 amiB Putative N-acetylmuramoyl-L-alanine amidase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q8K908 4.73e-54 182 39 1 222 3 amiB Putative N-acetylmuramoyl-L-alanine amidase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P63883 9.64e-48 172 31 9 392 1 amiC N-acetylmuramoyl-L-alanine amidase AmiC Escherichia coli (strain K12)
P63884 9.64e-48 172 31 9 392 3 amiC N-acetylmuramoyl-L-alanine amidase AmiC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P33772 3.07e-47 167 37 2 243 3 amiA N-acetylmuramoyl-L-alanine amidase AmiA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P36548 1.4e-46 165 37 2 243 1 amiA N-acetylmuramoyl-L-alanine amidase AmiA Escherichia coli (strain K12)
Q9K0V3 1.78e-41 155 35 2 235 1 amiC N-acetylmuramoyl-L-alanine amidase AmiC Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P54525 4.48e-19 88 28 5 222 3 yqiI Uncharacterized protein YqiI Bacillus subtilis (strain 168)
O32041 3.59e-15 80 28 11 269 3 yrvJ Putative N-acetylmuramoyl-L-alanine amidase YrvJ Bacillus subtilis (strain 168)
Q02114 1.27e-14 79 27 5 222 1 lytC N-acetylmuramoyl-L-alanine amidase LytC Bacillus subtilis (strain 168)
Q8CP02 2.58e-11 67 25 6 228 3 lytH Probable cell wall amidase LytH Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HNS0 3.56e-11 67 25 6 228 3 lytH Probable cell wall amidase LytH Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
O48471 5.81e-11 66 26 5 212 4 25 Endolysin Bacillus phage SPP1
Q4L6X7 7.96e-11 66 25 6 228 3 lytH Probable cell wall amidase LytH Staphylococcus haemolyticus (strain JCSC1435)
Q49Y70 8.03e-11 66 25 6 229 3 lytH Probable cell wall amidase LytH Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q7A0Q6 2.38e-10 64 25 8 228 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain MW2)
O32421 2.38e-10 64 25 8 228 3 lytH Probable cell wall amidase LytH Staphylococcus aureus
Q6G8T7 2.38e-10 64 25 8 228 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain MSSA476)
Q7A588 2.38e-10 64 25 8 228 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain N315)
Q7A2R2 2.38e-10 64 25 8 228 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HFD1 2.38e-10 64 25 8 228 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain COL)
Q2YT98 2.38e-10 64 25 8 228 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q2FXU3 2.38e-10 64 25 8 228 1 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FG95 2.38e-10 64 25 8 228 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain USA300)
Q06320 2.74e-09 61 26 7 225 1 cwlC Sporulation-specific N-acetylmuramoyl-L-alanine amidase Bacillus subtilis (strain 168)
P37134 1.19e-05 50 35 2 82 3 cwlM N-acetylmuramoyl-L-alanine amidase CwlM Bacillus licheniformis
P50864 3.2e-05 48 28 2 89 1 cwlD Germination-specific N-acetylmuramoyl-L-alanine amidase Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_11900
Feature type CDS
Gene amiC
Product N-acetylmuramoyl-L-alanine amidase
Location 95163 - 96470 (strand: -1)
Length 1308 (nucleotides) / 435 (amino acids)

Contig

Accession ZDB_689
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1362
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01520 N-acetylmuramoyl-L-alanine amidase
PF11741 AMIN domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0860 Cell wall/membrane/envelope biogenesis (M) M N-acetylmuramoyl-L-alanine amidase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Cationic antimicrobial peptide (CAMP) resistance -

Protein Sequence

MNAYLTRKSDVAAVSWLTALFFCVSLLFSAAGHAASLTGINVNNNGSQGTLQLSFDGKPQYKLFPLHDPERLVIDIRQPQKITGLPINLNNGLIKVVRESRAPDAQHQRIVLELADKNSFRDSADNSGLTITLTGKNSYSAAPVAAAQPVTTTSGKPLRMNSGSTAPATSAPAAVTPVSAPVQAKIPVVPTGKLPKNSRQVVVAIDAGHGGKDPGAIGQNGLKEKNVTISIARKLEKRLKDDPMFKPVLTRDGDYFISVAGRSEVARKFGSNMLVSIHADSAPNRTATGSSVWVLSNRRANNELGNWLEQSEKQSELLGGAGDALANGADPYLSQAVLDLQFGNSQRVGYAVAQDVIRQLRQIGKVHKGTPEHASLGVLRSPDIPSILVETGFISNSTEEQLLGSDTYQEQVAAAIHGGLRAYFTANPLQAAPSK

Flanking regions ( +/- flanking 50bp)

TGGTGAAGAACTCCTGGATAAGTTAGCGGAGATGTGAGGAATTACCGATAATGAATGCATATCTGACACGGAAATCTGATGTGGCTGCCGTTTCATGGCTGACGGCGCTGTTTTTCTGCGTGAGCCTGCTGTTCAGTGCAGCCGGGCACGCCGCGTCCCTGACGGGCATCAATGTGAACAACAACGGTTCTCAGGGCACATTACAGCTCAGTTTTGACGGCAAACCGCAATATAAACTGTTTCCGCTGCATGACCCGGAGCGTCTGGTGATCGACATCCGTCAGCCGCAGAAAATTACCGGTCTGCCGATTAATCTGAATAACGGGCTGATTAAAGTGGTCAGAGAGAGTCGTGCGCCGGATGCTCAGCATCAGCGCATCGTGCTGGAGCTGGCGGATAAAAACAGTTTCCGCGATTCTGCGGATAACAGCGGCCTGACCATCACGCTGACCGGCAAAAACAGTTATAGCGCAGCCCCGGTGGCTGCCGCACAACCGGTCACCACCACAAGCGGTAAACCGCTGCGCATGAACAGCGGCAGTACTGCTCCGGCAACATCGGCTCCGGCAGCTGTCACTCCGGTCTCTGCACCGGTACAGGCAAAAATCCCGGTGGTACCGACAGGTAAACTGCCGAAAAACAGCCGTCAGGTCGTGGTGGCAATTGATGCCGGACACGGCGGGAAAGACCCAGGCGCTATCGGCCAGAACGGCCTGAAAGAGAAAAACGTCACTATCAGTATCGCCCGCAAGCTGGAAAAGCGTCTGAAAGATGACCCGATGTTCAAACCGGTACTGACCCGTGACGGCGATTATTTTATCTCGGTGGCCGGACGCTCCGAAGTGGCGCGTAAATTCGGCTCCAACATGCTGGTGTCCATCCACGCAGATTCCGCACCAAACCGTACCGCGACCGGTTCGTCAGTCTGGGTGCTTTCCAACCGGCGGGCAAACAACGAATTAGGTAACTGGCTGGAACAGAGCGAGAAACAATCCGAACTGCTCGGCGGTGCCGGTGATGCACTGGCAAACGGTGCGGATCCGTATCTCAGCCAGGCGGTACTGGATTTGCAGTTCGGTAACTCCCAGCGTGTCGGTTATGCCGTGGCGCAGGACGTGATCCGTCAGCTGCGCCAGATAGGTAAAGTCCACAAAGGCACGCCGGAGCATGCGAGCCTCGGGGTGCTGCGTTCACCGGATATTCCGTCCATTCTGGTGGAAACCGGCTTTATCAGTAACAGCACTGAAGAACAGCTGTTAGGATCTGACACTTACCAGGAGCAGGTCGCTGCCGCGATCCACGGCGGGTTACGCGCATACTTTACCGCGAACCCGTTACAGGCAGCGCCGTCCAAATAACAGGAGAACGGGGGCAATTATGGCGATCCGGATTTTACCGCCGCAGCTGG