Homologs in group_1362

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08440 FBDBKF_08440 88.9 Morganella morganii S1 amiC N-acetylmuramoyl-L-alanine amidase
EHELCC_13085 EHELCC_13085 88.9 Morganella morganii S2 amiC N-acetylmuramoyl-L-alanine amidase
NLDBIP_13425 NLDBIP_13425 88.9 Morganella morganii S4 amiC N-acetylmuramoyl-L-alanine amidase
LHKJJB_13130 LHKJJB_13130 88.9 Morganella morganii S3 amiC N-acetylmuramoyl-L-alanine amidase
HKOGLL_11900 HKOGLL_11900 88.9 Morganella morganii S5 amiC N-acetylmuramoyl-L-alanine amidase
PMI_RS16735 PMI_RS16735 61.8 Proteus mirabilis HI4320 - N-acetylmuramoyl-L-alanine amidase

Distribution of the homologs in the orthogroup group_1362

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1362

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P26365 8.07e-138 404 54 10 423 1 amiB N-acetylmuramoyl-L-alanine amidase AmiB Escherichia coli (strain K12)
P26366 3.83e-134 394 53 8 420 3 amiB N-acetylmuramoyl-L-alanine amidase AmiB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44493 1.35e-91 285 58 1 226 3 amiB Probable N-acetylmuramoyl-L-alanine amidase AmiB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57638 1.42e-57 191 41 2 230 3 amiB Putative N-acetylmuramoyl-L-alanine amidase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89A33 4.33e-55 184 40 2 224 3 amiB Putative N-acetylmuramoyl-L-alanine amidase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q8K908 1.76e-53 181 38 1 221 3 amiB Putative N-acetylmuramoyl-L-alanine amidase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P63883 7.42e-49 174 32 12 387 1 amiC N-acetylmuramoyl-L-alanine amidase AmiC Escherichia coli (strain K12)
P63884 7.42e-49 174 32 12 387 3 amiC N-acetylmuramoyl-L-alanine amidase AmiC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P33772 6.89e-48 168 37 2 243 3 amiA N-acetylmuramoyl-L-alanine amidase AmiA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P36548 1.3e-47 167 38 2 243 1 amiA N-acetylmuramoyl-L-alanine amidase AmiA Escherichia coli (strain K12)
Q9K0V3 1.47e-44 162 30 11 407 1 amiC N-acetylmuramoyl-L-alanine amidase AmiC Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P54525 3.7e-19 88 27 6 250 3 yqiI Uncharacterized protein YqiI Bacillus subtilis (strain 168)
O32041 1.41e-16 85 29 9 235 3 yrvJ Putative N-acetylmuramoyl-L-alanine amidase YrvJ Bacillus subtilis (strain 168)
Q02114 3.82e-16 83 28 7 253 1 lytC N-acetylmuramoyl-L-alanine amidase LytC Bacillus subtilis (strain 168)
O48471 5.52e-12 69 27 5 212 4 25 Endolysin Bacillus phage SPP1
Q8CP02 7.56e-11 66 23 5 227 3 lytH Probable cell wall amidase LytH Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HNS0 9.61e-11 65 23 5 227 3 lytH Probable cell wall amidase LytH Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q06320 2.94e-10 63 41 2 82 1 cwlC Sporulation-specific N-acetylmuramoyl-L-alanine amidase Bacillus subtilis (strain 168)
Q49Y70 4.24e-10 63 25 7 227 3 lytH Probable cell wall amidase LytH Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q4L6X7 4.61e-10 63 24 6 228 3 lytH Probable cell wall amidase LytH Staphylococcus haemolyticus (strain JCSC1435)
Q7A0Q6 4.65e-10 63 23 8 269 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain MW2)
O32421 4.65e-10 63 23 8 269 3 lytH Probable cell wall amidase LytH Staphylococcus aureus
Q6G8T7 4.65e-10 63 23 8 269 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain MSSA476)
Q7A588 4.65e-10 63 23 8 269 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain N315)
Q7A2R2 4.65e-10 63 23 8 269 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HFD1 4.65e-10 63 23 8 269 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain COL)
Q2YT98 4.65e-10 63 23 8 269 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q2FXU3 4.65e-10 63 23 8 269 1 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FG95 4.65e-10 63 23 8 269 3 lytH Probable cell wall amidase LytH Staphylococcus aureus (strain USA300)
P37134 1.18e-06 53 37 2 82 3 cwlM N-acetylmuramoyl-L-alanine amidase CwlM Bacillus licheniformis
P50864 1.51e-05 49 28 2 96 1 cwlD Germination-specific N-acetylmuramoyl-L-alanine amidase Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09660
Feature type CDS
Gene -
Product N-acetylmuramoyl-L-alanine amidase
Location 33539 - 34774 (strand: 1)
Length 1236 (nucleotides) / 411 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1362
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01520 N-acetylmuramoyl-L-alanine amidase
PF11741 AMIN domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0860 Cell wall/membrane/envelope biogenesis (M) M N-acetylmuramoyl-L-alanine amidase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Cationic antimicrobial peptide (CAMP) resistance -

Protein Sequence

MSLLFTVTGQAAVLTALNVTNDGSQGTLLLDFDAKPDYKLFPLHDPERLVIDIRQSQKITGLPMKLNNGLIKVVRESKAPDAQHQRIVLELAEKNSVRDAVVNKGGQPQLVITLTGKNGYSSPASAPVAAAQPVTGSGKPLRMNNSAPAVSAPVAEPVQTKIPVVPTGKIPKNSRQVVVAIDAGHGGKDPGAIGQNGLKEKNVTISIARKLEKRLKNDPMFKPVLTRDGDYFISVAGRSEVARKFGANMLVSVHADSAPNRTARGSSVWVLSNRRANNELGSWLEKSEKQSELLGGAGDALANGADPYLSQAVLDLQFGNSQRVGYAVAQDVIRQLRQVGKVHKGTPEHASLGVLRSPDIPSILVETGFISNESEEQLLGSDTYQEQVAAAIHGGLRAYFTANPLQAAPSK

Flanking regions ( +/- flanking 50bp)

GGAAACCGGGTTTAACCTCAGTGTCATGGCTGGCGGGGCTTTTATTTTGTATGAGCCTCCTGTTTACGGTCACCGGACAGGCTGCGGTACTGACAGCGCTGAATGTGACCAATGACGGGTCACAGGGTACATTGTTACTCGATTTTGATGCAAAACCGGATTACAAACTGTTTCCGCTGCACGACCCTGAACGGTTGGTGATTGATATCCGCCAGTCACAGAAAATTACCGGGCTGCCGATGAAGCTCAATAACGGGCTGATTAAGGTTGTCCGGGAAAGCAAGGCTCCTGATGCACAACATCAGCGCATTGTGCTGGAGCTGGCAGAGAAAAACAGTGTCCGCGACGCTGTTGTGAATAAGGGCGGGCAGCCTCAGCTGGTCATTACCCTGACCGGAAAGAATGGTTATTCATCACCGGCATCTGCTCCGGTGGCAGCGGCACAGCCGGTGACCGGTTCCGGTAAACCGCTGAGGATGAATAACAGCGCACCGGCTGTTTCTGCACCGGTCGCAGAGCCTGTTCAGACAAAAATCCCGGTAGTACCGACAGGTAAAATACCGAAAAACAGCCGTCAGGTTGTGGTCGCGATTGATGCCGGGCACGGCGGGAAAGATCCCGGCGCGATTGGTCAGAACGGACTGAAAGAAAAAAATGTCACTATCAGTATCGCCCGCAAGCTTGAAAAACGCCTGAAAAATGACCCGATGTTTAAACCGGTTCTGACCCGCGACGGAGACTATTTTATCTCAGTTGCCGGGCGTTCAGAGGTTGCCCGTAAATTCGGCGCCAATATGCTGGTGTCTGTTCACGCAGACTCTGCACCAAACCGCACTGCGCGGGGTTCTTCTGTATGGGTGCTCTCTAACCGCCGTGCAAACAACGAATTAGGCAGCTGGCTTGAGAAGAGCGAGAAGCAATCTGAGTTACTTGGCGGCGCAGGGGATGCACTGGCAAATGGTGCGGATCCGTATCTCAGCCAGGCGGTGCTGGATTTGCAGTTCGGTAACTCTCAGCGGGTCGGCTATGCCGTGGCACAGGATGTTATCCGCCAGCTCCGTCAGGTGGGTAAAGTTCATAAAGGTACGCCGGAACATGCTAGTCTCGGGGTTCTGCGCTCGCCGGATATTCCGTCCATTCTGGTGGAAACCGGGTTTATCAGTAATGAATCCGAAGAGCAGCTTTTAGGATCAGATACGTATCAGGAGCAGGTCGCTGCCGCGATCCACGGCGGATTACGCGCCTATTTTACGGCGAATCCGCTCCAGGCCGCGCCGTCCAAATAACAGAGAAACGGGAGCGATTATGGCAATCCGGATTTTACCGCCACAGTTGG