PF11656


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11656, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11656
Description YjbD family (DUF3811)

Occurence in the database

PF11656 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1921 FBDBKF_14295 59463 59732 -1 DUF3811 domain-containing protein Morganella morganii S1
1 group_1921 EHELCC_07985 57253 57522 1 DUF3811 domain-containing protein Morganella morganii S2
2 group_1921 NLDBIP_08310 57253 57522 1 DUF3811 domain-containing protein Morganella morganii S4
3 group_1921 LHKJJB_05955 199637 199906 -1 DUF3811 domain-containing protein Morganella morganii S3
4 group_1921 HKOGLL_04960 41844 42113 1 DUF3811 domain-containing protein Morganella morganii S5
5 group_1921 F4V73_RS02610 550734 551003 1 DUF3811 domain-containing protein Morganella psychrotolerans
6 group_1921 PMI_RS06135 1346007 1346270 1 DUF3811 domain-containing protein Proteus mirabilis HI4320