PF09330


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF09330, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF09330
Description D-lactate dehydrogenase, membrane binding

Occurence in the database

PF09330 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1971 FBDBKF_14780 53558 55303 -1 dld D-lactate dehydrogenase Morganella morganii S1
1 group_1971 EHELCC_15585 83634 85379 -1 dld D-lactate dehydrogenase Morganella morganii S2
2 group_1971 NLDBIP_16115 83634 85379 -1 dld D-lactate dehydrogenase Morganella morganii S4
3 group_1971 LHKJJB_15725 31307 33052 1 dld D-lactate dehydrogenase Morganella morganii S3
4 group_1971 HKOGLL_14845 30519 32264 1 dld D-lactate dehydrogenase Morganella morganii S5
5 group_1971 F4V73_RS07575 1582739 1584484 -1 dld D-lactate dehydrogenase Morganella psychrotolerans
6 group_1971 PMI_RS04160 935450 937219 1 dld D-lactate dehydrogenase Proteus mirabilis HI4320