PF08525


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08525, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08525
Description Opacity-associated protein A N-terminal motif

Occurence in the database

PF08525 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_640 FBDBKF_02090 105691 107073 1 mepM murein DD-endopeptidase MepM Morganella morganii S1
1 group_640 EHELCC_02560 493511 494893 1 mepM murein DD-endopeptidase MepM Morganella morganii S2
2 group_640 NLDBIP_00900 185243 186625 -1 mepM murein DD-endopeptidase MepM Morganella morganii S4
3 group_640 LHKJJB_01135 206060 207442 1 mepM murein DD-endopeptidase MepM Morganella morganii S3
4 group_640 HKOGLL_01175 211571 212953 1 mepM murein DD-endopeptidase MepM Morganella morganii S5
5 group_640 F4V73_RS04455 941703 943061 1 mepM murein DD-endopeptidase MepM Morganella psychrotolerans
6 group_640 PMI_RS05565 1213205 1214533 1 mepM murein DD-endopeptidase MepM Proteus mirabilis HI4320
7 group_1376 PMI_RS16810 3704342 3705001 -1 LysM-like peptidoglycan-binding domain-containing protein Proteus mirabilis HI4320