Orthogroup:group_1432


Homologs in group_1432

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08850 FBDBKF_08850 Morganella morganii S1 lptF LPS export ABC transporter permease LptF
EHELCC_12675 EHELCC_12675 Morganella morganii S2 lptF LPS export ABC transporter permease LptF
NLDBIP_13015 NLDBIP_13015 Morganella morganii S4 lptF LPS export ABC transporter permease LptF
LHKJJB_13540 LHKJJB_13540 Morganella morganii S3 lptF LPS export ABC transporter permease LptF
HKOGLL_11490 HKOGLL_11490 Morganella morganii S5 lptF LPS export ABC transporter permease LptF
F4V73_RS10065 F4V73_RS10065 Morganella psychrotolerans lptF LPS export ABC transporter permease LptF
PMI_RS17270 PMI_RS17270 Proteus mirabilis HI4320 lptF LPS export ABC transporter permease LptF

Distribution of group_1432 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1432 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1432

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1432.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lptF 7

Product

# Product Occurence
1 LPS export ABC transporter permease LptF 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0795 7 MN Cell wall/membrane/envelope biogenesis (M)
Cell motility (N)		 Lipopolysaccharide export LptBFGC system, permease protein LptF

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07091 7 lipopolysaccharide export system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03739 7 Lipopolysaccharide export system permease LptF/LptG

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Lipopolysaccharide export system permease protein LptF 5

Protein length

Min length 365
Max length 367
Mean length (sd) 366.7 (0.8)
Median length 367.0

Protein length distribution