PF08032


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF08032
Protein list: lists the 14 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF08032
Description RNA 2'-O ribose methyltransferase substrate binding

Occurence in the database

PF08032 is associated with 14 different proteins
The 14 proteins are classified into 2 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1428 FBDBKF_08490 80252 80986 1 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB Morganella morganii S1
1 group_1620 FBDBKF_10195 132410 133498 -1 spoU tRNA/rRNA methyltransferase Morganella morganii S1
2 group_1620 EHELCC_04995 324375 325463 -1 spoU tRNA/rRNA methyltransferase Morganella morganii S2
3 group_1428 EHELCC_13035 82739 83473 -1 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB Morganella morganii S2
4 group_1620 NLDBIP_04995 324171 325259 -1 spoU tRNA/rRNA methyltransferase Morganella morganii S4
5 group_1428 NLDBIP_13375 82739 83473 -1 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB Morganella morganii S4
6 group_1428 LHKJJB_13180 78970 79704 1 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB Morganella morganii S3
7 group_1620 LHKJJB_13635 10119 11207 1 spoU tRNA/rRNA methyltransferase Morganella morganii S3
8 group_1428 HKOGLL_11850 82739 83473 -1 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB Morganella morganii S5
9 group_1620 HKOGLL_12900 133191 134279 -1 spoU tRNA/rRNA methyltransferase Morganella morganii S5
10 group_1620 F4V73_RS00135 36468 37547 1 tRNA/rRNA methyltransferase Morganella psychrotolerans
11 group_1428 F4V73_RS09710 46443 47177 1 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB Morganella psychrotolerans
12 group_1620 PMI_RS01975 465490 466593 1 tRNA/rRNA methyltransferase Proteus mirabilis HI4320
13 group_1428 PMI_RS16785 3701905 3702636 1 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB Proteus mirabilis HI4320