PF07963
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF07963
Protein list: lists the 14 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.
Description
External link |
PF07963 |
Description |
Prokaryotic N-terminal methylation motif |
Occurence in the database
PF07963 is associated with 14 different
proteins
|
The 14 proteins are classified into 3 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_911 |
FBDBKF_04255 |
39424 |
39843 |
1 |
ppdD |
prepilin peptidase-dependent pilin |
Morganella morganii S1 |
1 |
group_2725 |
FBDBKF_06170 |
63479 |
63811 |
-1 |
pilV |
Type IV pilus assembly protein PilV |
Morganella morganii S1 |
2 |
group_911 |
EHELCC_05545 |
98881 |
99300 |
1 |
ppdD |
prepilin peptidase-dependent pilin |
Morganella morganii S2 |
3 |
group_2725 |
EHELCC_09215 |
64051 |
64383 |
-1 |
pilV |
Type IV pilus assembly protein PilV |
Morganella morganii S2 |
4 |
group_911 |
NLDBIP_05865 |
139946 |
140365 |
1 |
ppdD |
prepilin peptidase-dependent pilin |
Morganella morganii S4 |
5 |
group_2725 |
NLDBIP_09595 |
64051 |
64383 |
-1 |
pilV |
Type IV pilus assembly protein PilV |
Morganella morganii S4 |
6 |
group_911 |
LHKJJB_02745 |
117470 |
117889 |
1 |
ppdD |
prepilin peptidase-dependent pilin |
Morganella morganii S3 |
7 |
group_2725 |
LHKJJB_08160 |
152855 |
153187 |
1 |
pilV |
Type IV pilus assembly protein PilV |
Morganella morganii S3 |
8 |
group_911 |
HKOGLL_06220 |
39334 |
39753 |
1 |
ppdD |
prepilin peptidase-dependent pilin |
Morganella morganii S5 |
9 |
group_2725 |
HKOGLL_07710 |
152855 |
153187 |
1 |
pilV |
Type IV pilus assembly protein PilV |
Morganella morganii S5 |
10 |
group_911 |
F4V73_RS08700 |
1800493 |
1800912 |
1 |
ppdD |
prepilin peptidase-dependent pilin |
Morganella psychrotolerans |
11 |
group_2725 |
F4V73_RS15745 |
150341 |
150709 |
1 |
|
prepilin-type N-terminal cleavage/methylation domain-containing protein |
Morganella psychrotolerans |
12 |
group_911 |
PMI_RS10100 |
2207345 |
2207788 |
1 |
ppdD |
prepilin peptidase-dependent pilin |
Proteus mirabilis HI4320 |
13 |
group_4030 |
PMI_RS11450 |
2523069 |
2523548 |
-1 |
|
prepilin-type N-terminal cleavage/methylation domain-containing protein |
Proteus mirabilis HI4320 |