PF07676


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07676, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07676
Description WD40-like Beta Propeller Repeat

Occurence in the database

PF07676 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1506 FBDBKF_09740 44019 45311 -1 tolB Tol-Pal system protein TolB Morganella morganii S1
1 group_1506 EHELCC_04540 235984 237276 -1 tolB Tol-Pal system protein TolB Morganella morganii S2
2 group_1506 NLDBIP_04540 235780 237072 -1 tolB Tol-Pal system protein TolB Morganella morganii S4
3 group_1506 LHKJJB_14090 98306 99598 1 tolB Tol-Pal system protein TolB Morganella morganii S3
4 group_1506 HKOGLL_12445 44800 46092 -1 tolB Tol-Pal system protein TolB Morganella morganii S5
5 group_1506 F4V73_RS00600 127299 128591 1 tolB Tol-Pal system beta propeller repeat protein TolB Morganella psychrotolerans
6 group_1506 PMI_RS02870 630568 631863 1 tolB Tol-Pal system beta propeller repeat protein TolB Proteus mirabilis HI4320
7 group_1723 PMI_RS14135 3137621 3138907 -1 DUF3748 domain-containing protein Proteus mirabilis HI4320