PF07437


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07437, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07437
Description YfaZ precursor

Occurence in the database

PF07437 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1879 FBDBKF_14055 2816 3355 -1 Porin Morganella morganii S1
1 group_1879 EHELCC_08225 113630 114169 1 Porin Morganella morganii S2
2 group_1879 NLDBIP_08550 113630 114169 1 Porin Morganella morganii S4
3 group_1879 LHKJJB_05715 142990 143529 -1 Porin Morganella morganii S3
4 group_1879 HKOGLL_05200 98221 98760 1 Porin Morganella morganii S5
5 group_1879 F4V73_RS02885 613176 613715 1 YfaZ family outer membrane protein Morganella psychrotolerans
6 group_1879 PMI_RS08535 1861149 1861691 -1 YfaZ family outer membrane protein Proteus mirabilis HI4320