Orthogroup:group_1917


Homologs in group_1917

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14270 FBDBKF_14270 Morganella morganii S1 asd aspartate-semialdehyde dehydrogenase
EHELCC_08010 EHELCC_08010 Morganella morganii S2 asd aspartate-semialdehyde dehydrogenase
NLDBIP_08335 NLDBIP_08335 Morganella morganii S4 asd aspartate-semialdehyde dehydrogenase
LHKJJB_05930 LHKJJB_05930 Morganella morganii S3 asd aspartate-semialdehyde dehydrogenase
HKOGLL_04985 HKOGLL_04985 Morganella morganii S5 asd aspartate-semialdehyde dehydrogenase
F4V73_RS02640 F4V73_RS02640 Morganella psychrotolerans - aspartate-semialdehyde dehydrogenase
PMI_RS08780 PMI_RS08780 Proteus mirabilis HI4320 - aspartate-semialdehyde dehydrogenase

Distribution of group_1917 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1917 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1917

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1917.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 asd 5
2 - 2

Product

# Product Occurence
1 aspartate-semialdehyde dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0136 7 E Amino acid transport and metabolism (E) Aspartate-semialdehyde dehydrogenase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00133 7 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Glycine, serine and threonine metabolism
Monobactam biosynthesis
Cysteine and methionine metabolism
Lysine biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
2-Oxocarboxylic acid metabolism
Biosynthesis of amino acids		 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Methionine biosynthesis, aspartate => homoserine => methionine
Threonine biosynthesis, aspartate => homoserine => threonine
Ectoine biosynthesis, aspartate => ectoine
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01118 7 Semialdehyde dehydrogenase, NAD binding domain
PF02774 7 Semialdehyde dehydrogenase, dimerisation domain

Annotations of the 40 SwissProt hits

Annotation Number of occurrences
Aspartate-semialdehyde dehydrogenase 31
Aspartate-semialdehyde dehydrogenase (Fragment) 1
Aspartate-semialdehyde dehydrogenase 2 1
Malonyl-CoA reductase 1
N-acetyl-gamma-glutamyl-phosphate reductase 1
Probable aspartate-semialdehyde dehydrogenase 1
USG-1 protein 1
USG-1 protein homolog 3

Protein length

Unique protein length 336

Protein length distribution