Homologs in group_1879

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14055 FBDBKF_14055 82.1 Morganella morganii S1 - Porin
EHELCC_08225 EHELCC_08225 82.1 Morganella morganii S2 - Porin
NLDBIP_08550 NLDBIP_08550 82.1 Morganella morganii S4 - Porin
LHKJJB_05715 LHKJJB_05715 82.1 Morganella morganii S3 - Porin
HKOGLL_05200 HKOGLL_05200 82.1 Morganella morganii S5 - Porin
PMI_RS08535 PMI_RS08535 60.3 Proteus mirabilis HI4320 - YfaZ family outer membrane protein

Distribution of the homologs in the orthogroup group_1879

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1879

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76471 3.9e-41 139 43 1 180 3 yfaZ Outer membrane protein YfaZ Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02885
Feature type CDS
Gene -
Product YfaZ family outer membrane protein
Location 613176 - 613715 (strand: 1)
Length 540 (nucleotides) / 179 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1879
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07437 YfaZ precursor

Protein Sequence

MKKYMAAAAASLMFVAGAANAVSMSMQAGKKYTDMNVGFGNPNAGLSFDGNWARSDHAGQLGGARAKFAFPLGPVSASIGGKALYLDPDSGKKGLAVAPGVGVAWSIMPSLSVYGEYYGAPSALVSGNDSYKEANVGANWTVFAPLSVNAGYRKIEVESNNGHENRIADGAYLGAGLSF

Flanking regions ( +/- flanking 50bp)

ATTTCAGAGAAAATGCTCAGAACCCTGTCTGATTTTAATGTGGTGGCATAATGAAAAAATATATGGCGGCTGCGGCTGCATCACTGATGTTTGTTGCTGGTGCGGCAAATGCGGTATCAATGAGTATGCAGGCCGGTAAGAAATATACCGATATGAATGTTGGTTTCGGTAACCCGAATGCCGGTTTATCGTTTGATGGTAACTGGGCGCGCAGTGATCATGCGGGTCAGCTCGGCGGTGCCAGAGCTAAATTTGCCTTTCCGTTAGGTCCTGTCTCTGCCAGCATCGGCGGGAAAGCGCTGTATCTGGACCCGGATTCCGGCAAAAAAGGACTGGCAGTTGCACCCGGCGTGGGTGTGGCGTGGAGTATTATGCCGTCACTGAGTGTTTACGGTGAATATTATGGTGCGCCGTCAGCACTGGTATCCGGTAACGATTCATATAAAGAAGCGAATGTGGGTGCTAACTGGACAGTTTTTGCGCCGCTTAGTGTGAACGCCGGCTATCGCAAAATTGAAGTGGAATCAAACAACGGTCATGAAAACCGGATTGCCGATGGTGCATATCTGGGTGCCGGGCTGAGTTTCTGATTATTACCCTTATATACCCTTTTGAATGACGTTGGGTATATGTTGGGCAG