PF06836


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF06836, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 9 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF06836
Description Protein of unknown function (DUF1240)

Occurence in the database

PF06836 is associated with 9 different proteins (see tab "Protein list" and "Profile")
The 9 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_176 FBDBKF_01385 272267 272686 -1 DUF1240 domain-containing protein Morganella morganii S1
1 group_176 EHELCC_00160 36182 36601 1 DUF1240 domain-containing protein Morganella morganii S2
2 group_176 NLDBIP_03300 643535 643954 -1 DUF1240 domain-containing protein Morganella morganii S4
3 group_176 LHKJJB_04815 250776 251195 -1 DUF1240 domain-containing protein Morganella morganii S3
4 group_176 HKOGLL_02230 36387 36806 1 DUF1240 domain-containing protein Morganella morganii S5
5 group_176 F4V73_RS10130 136343 136744 -1 DUF1240 domain-containing protein Morganella psychrotolerans
6 group_176 PMI_RS15225 3379144 3379548 -1 DUF1240 domain-containing protein Proteus mirabilis HI4320
7 group_176 PMI_RS19695 3379767 3379946 -1 DUF1240 domain-containing protein Proteus mirabilis HI4320
8 group_176 PMI_RS19175 3959393 3959596 1 DUF1240 domain-containing protein Proteus mirabilis HI4320