PF06325


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF06325, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF06325
Description Ribosomal protein L11 methyltransferase (PrmA)

Occurence in the database

PF06325 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_755 FBDBKF_03370 75737 76621 1 prmA 50S ribosomal protein L11 methyltransferase Morganella morganii S1
1 group_755 EHELCC_07165 170482 171366 -1 prmA 50S ribosomal protein L11 methyltransferase Morganella morganii S2
2 group_755 NLDBIP_07490 170355 171239 -1 prmA 50S ribosomal protein L11 methyltransferase Morganella morganii S4
3 group_755 LHKJJB_07025 134101 134985 -1 prmA 50S ribosomal protein L11 methyltransferase Morganella morganii S3
4 group_755 HKOGLL_03905 98402 99286 1 prmA 50S ribosomal protein L11 methyltransferase Morganella morganii S5
5 group_755 F4V73_RS11560 462145 463029 -1 prmA 50S ribosomal protein L11 methyltransferase Morganella psychrotolerans
6 group_755 PMI_RS18030 3961247 3962128 -1 prmA 50S ribosomal protein L11 methyltransferase Proteus mirabilis HI4320