PF05433


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05433, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05433
Description Glycine zipper 2TM domain

Occurence in the database

PF05433 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1017 FBDBKF_05680 143767 144234 1 Glycine zipper 2TM domain-containing protein Morganella morganii S1
1 group_2248 FBDBKF_17210 23779 23997 1 osmB osmotically-inducible lipoprotein OsmB Morganella morganii S1
2 group_2248 EHELCC_01680 331504 331722 -1 osmB osmotically-inducible lipoprotein OsmB Morganella morganii S2
3 group_1017 EHELCC_11910 37260 37727 -1 Glycine zipper 2TM domain-containing protein Morganella morganii S2
4 group_2248 NLDBIP_01780 348414 348632 1 osmB osmotically-inducible lipoprotein OsmB Morganella morganii S4
5 group_1017 NLDBIP_12250 37215 37682 -1 Glycine zipper 2TM domain-containing protein Morganella morganii S4
6 group_2248 LHKJJB_00255 44053 44271 -1 osmB osmotically-inducible lipoprotein OsmB Morganella morganii S3
7 group_1017 LHKJJB_12110 37260 37727 -1 Glycine zipper 2TM domain-containing protein Morganella morganii S3
8 group_2248 HKOGLL_00295 49564 49782 -1 osmB osmotically-inducible lipoprotein OsmB Morganella morganii S5
9 group_1017 HKOGLL_10725 37260 37727 -1 Glycine zipper 2TM domain-containing protein Morganella morganii S5
10 group_1017 F4V73_RS03625 770469 770939 -1 glycine zipper 2TM domain-containing protein Morganella psychrotolerans
11 group_2248 F4V73_RS05970 1268289 1268510 1 osmB osmotically-inducible lipoprotein OsmB Morganella psychrotolerans
12 group_2248 PMI_RS06210 1361449 1361670 1 osmB osmotically-inducible lipoprotein OsmB Proteus mirabilis HI4320
13 group_1017 PMI_RS06710 1467591 1468058 1 glycine zipper 2TM domain-containing protein Proteus mirabilis HI4320