PF04865


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04865, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 9 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04865
Description Baseplate J-like protein

Occurence in the database

PF04865 is associated with 9 different proteins (see tab "Protein list" and "Profile")
The 9 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_352 FBDBKF_12700 52112 53299 -1 Phage-related protein Morganella morganii S1
1 group_352 FBDBKF_17245 28730 29917 -1 jayE Uncharacterized phage protein gp47/JayE Morganella morganii S1
2 group_352 EHELCC_01645 325584 326771 1 jayE Uncharacterized phage protein gp47/JayE Morganella morganii S2
3 group_352 NLDBIP_01815 353365 354552 -1 jayE Uncharacterized phage protein gp47/JayE Morganella morganii S4
4 group_352 LHKJJB_00220 38133 39320 1 jayE Uncharacterized phage protein gp47/JayE Morganella morganii S3
5 group_352 HKOGLL_00260 43644 44831 1 jayE Uncharacterized phage protein gp47/JayE Morganella morganii S5
6 group_352 F4V73_RS06040 1280677 1281864 -1 baseplate J/gp47 family protein Morganella psychrotolerans
7 group_352 PMI_RS08380 1830211 1831398 -1 baseplate J/gp47 family protein Proteus mirabilis HI4320
8 group_4500 PMI_RS09760 2127291 2128199 -1 baseplate assembly protein Proteus mirabilis HI4320