Homologs in group_4500

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4500

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4500

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P51767 1.06e-146 417 66 0 302 3 J Baseplate protein J Escherichia phage P2

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09760
Feature type CDS
Gene -
Product baseplate assembly protein
Location 2127291 - 2128199 (strand: -1)
Length 909 (nucleotides) / 302 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4500
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF04865 Baseplate J-like protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3948 Mobilome: prophages, transposons (X) X Phage-related baseplate assembly protein

Protein Sequence

MPTINLSQLTPPDVIESLDAEQLLRERKTALIAAMPPHLRDAIANTLSLESEPLTKLLEENVYRELLLRQRINESARAVMVAYAKGADLDQLAANYNLSRLVLRPANNNTIPPTPAILESDDDLRLRIPAAFEGLSVAGPVGSYEFHARSADGRVSDVSVISPTPANVTISVLSREGDGTASEELLRIVEHALNDEDVRPVADRIKVQSAQIIPYQIDATLFLFPGPESEPIRKEANQRLTQYITEQHRLGRDIRLSAIYAALHVEGVQRVELKQPTKDVVLDKTQASYCTQSTLTIGGSDE

Flanking regions ( +/- flanking 50bp)

TTACGCCCATAACCAACAACCGATTAATTTCTCTCTACCGGTGACATAACATGCCTACGATTAACTTAAGCCAATTAACACCGCCCGATGTGATTGAGTCGTTAGATGCAGAACAATTATTACGCGAACGCAAAACGGCATTGATTGCTGCGATGCCACCGCATTTACGTGATGCGATTGCTAACACGTTATCGTTAGAGTCTGAACCACTGACCAAGTTGTTAGAAGAAAACGTCTATCGTGAGTTGTTATTGCGCCAGCGTATCAATGAGTCTGCCCGCGCGGTGATGGTGGCGTATGCAAAAGGGGCGGATTTAGATCAGTTAGCGGCGAATTATAATTTATCGCGTTTAGTGTTACGCCCTGCCAATAACAACACTATTCCGCCTACACCGGCGATTTTAGAGTCTGACGATGATTTGCGTTTACGCATTCCCGCCGCGTTTGAGGGGCTAAGTGTTGCGGGGCCGGTGGGTAGTTATGAATTTCATGCCCGTAGTGCCGATGGTCGAGTGTCCGATGTGTCCGTGATCAGCCCAACGCCGGCAAATGTCACTATCTCGGTGTTATCTCGTGAGGGTGACGGCACCGCATCGGAAGAATTACTGCGCATTGTTGAGCACGCGTTAAACGATGAAGATGTGCGACCAGTTGCTGATCGCATCAAAGTGCAATCCGCCCAAATTATCCCTTATCAAATTGATGCCACGTTGTTTTTATTTCCGGGGCCTGAGTCGGAGCCGATACGCAAAGAAGCAAATCAACGTCTGACGCAATACATCACAGAGCAACACCGCTTAGGGCGTGATATTCGTCTGTCAGCGATTTATGCCGCATTGCATGTGGAAGGTGTGCAACGTGTGGAGTTAAAACAACCCACTAAAGATGTAGTGCTTGATAAAACACAAGCTTCGTATTGCACACAAAGCACCTTAACCATTGGTGGCTCGGATGAATAGTTTATTACCGTCAGGCAGTAGCCCATTAGAAAAAGCCGCCGCCATTGCCT