Orthogroup:group_319


Homologs in group_319

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09375 FBDBKF_09375 Morganella morganii S1 sctJ type III secretion inner membrane ring lipoprotein SctJ
EHELCC_10035 EHELCC_10035 Morganella morganii S2 sctJ type III secretion inner membrane ring lipoprotein SctJ
NLDBIP_10380 NLDBIP_10380 Morganella morganii S4 sctJ type III secretion inner membrane ring lipoprotein SctJ
LHKJJB_10975 LHKJJB_10975 Morganella morganii S3 sctJ type III secretion inner membrane ring lipoprotein SctJ
HKOGLL_14035 HKOGLL_14035 Morganella morganii S5 sctJ type III secretion inner membrane ring lipoprotein SctJ
F4V73_RS08395 F4V73_RS08395 Morganella psychrotolerans sctJ type III secretion inner membrane ring lipoprotein SctJ
F4V73_RS10590 F4V73_RS10590 Morganella psychrotolerans sctJ type III secretion inner membrane ring lipoprotein SctJ
PMI_RS13310 PMI_RS13310 Proteus mirabilis HI4320 sctJ type III secretion inner membrane ring lipoprotein SctJ

Distribution of group_319 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_319 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_319

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_319.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sctJ 8

Product

# Product Occurence
1 type III secretion inner membrane ring lipoprotein SctJ 8

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4669 8 U Intracellular trafficking, secretion, and vesicular transport (U) Type III secretory pathway, lipoprotein EscJ

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03222 1 type III secretion protein J Bacterial secretion system EHEC/EPEC pathogenicity signature, T3SS and effectors
Xanthomonas spp. pathogenicity signature, T3SS and effectors
K22505 7 type III secretion system inner membrane ring protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01514 8 Secretory protein of YscJ/FliF family

Annotations of the 11 SwissProt hits

Annotation Number of occurrences
Lipoprotein MxiJ 2
Lipoprotein PrgK 1
Nodulation protein NolT 2
Protein hrpB3 1
Secretion system apparatus lipoprotein SsaJ 2
Yop proteins translocation lipoprotein J 3

Protein length

Min length 245
Max length 259
Mean length (sd) 247.5 (5.0)
Median length 245.0

Protein length distribution