PF04463


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04463, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 9 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04463
Description 2-thiouracil desulfurase

Occurence in the database

PF04463 is associated with 9 different proteins (see tab "Protein list" and "Profile")
The 9 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3661 FBDBKF_12840 73323 74318 -1 Uncharacterized conserved protein Morganella morganii S1
1 group_3522 FBDBKF_18295 23647 24138 1 ybbK DUF523 domain-containing protein Morganella morganii S1
2 group_3522 EHELCC_18330 23520 24011 1 ybbK DUF523 domain-containing protein Morganella morganii S2
3 group_3522 NLDBIP_18255 23721 24212 1 ybbK DUF523 domain-containing protein Morganella morganii S4
4 group_3661 NLDBIP_19065 3749 4744 -1 Uncharacterized conserved protein Morganella morganii S4
5 group_3522 LHKJJB_18450 23559 24050 1 ybbK DUF523 domain-containing protein Morganella morganii S3
6 group_3661 LHKJJB_18955 3749 4744 -1 Uncharacterized conserved protein Morganella morganii S3
7 group_3522 HKOGLL_18185 23537 24028 1 ybbK DUF523 domain-containing protein Morganella morganii S5
8 group_3661 PMI_RS04805 1056469 1057464 1 DUF523 and DUF1722 domain-containing protein Proteus mirabilis HI4320