Homologs in group_3522

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18295 FBDBKF_18295 100.0 Morganella morganii S1 ybbK DUF523 domain-containing protein
EHELCC_18330 EHELCC_18330 100.0 Morganella morganii S2 ybbK DUF523 domain-containing protein
NLDBIP_18255 NLDBIP_18255 100.0 Morganella morganii S4 ybbK DUF523 domain-containing protein
HKOGLL_18185 HKOGLL_18185 100.0 Morganella morganii S5 ybbK DUF523 domain-containing protein

Distribution of the homologs in the orthogroup group_3522

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3522

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q45584 7.63e-40 134 45 0 146 4 ybbK Uncharacterized protein YbbK Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_18450
Feature type CDS
Gene ybbK
Product DUF523 domain-containing protein
Location 23559 - 24050 (strand: 1)
Length 492 (nucleotides) / 163 (amino acids)

Contig

Accession ZDB_383
Length 35029 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3522
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF04463 2-thiouracil desulfurase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1683 Function unknown (S) S Uncharacterized conserved protein YbbK, DUF523 family

Protein Sequence

MIAISVCLAGEAVRYDGCHKLYAPLKALQNSGMAVPVCPEILGGLPVPRAPAEITGGEGCDVWAGTARVTGSDGEDVTDAFKQGALRALEHLQQRNITHVILKANSPSCGSGVIYSGAFDGILKSGNGVATALFETNGITVWHEDHPELPALIEQLLQNGKSA

Flanking regions ( +/- flanking 50bp)

GTATTGATTATCACTATCTGAATTATACCGGTAAACACGGCGAGAATATGATGATTGCAATCAGTGTCTGCCTGGCAGGTGAAGCCGTCCGTTACGACGGCTGCCATAAATTATATGCTCCGCTGAAAGCGCTGCAGAACAGCGGAATGGCGGTTCCGGTATGCCCTGAAATCCTCGGAGGTCTGCCGGTGCCCCGCGCCCCGGCGGAAATCACCGGTGGTGAGGGTTGTGATGTCTGGGCGGGTACCGCCCGGGTTACCGGCAGTGACGGCGAAGATGTCACTGATGCCTTTAAACAGGGCGCACTGCGGGCACTGGAGCATCTGCAACAGCGGAATATCACGCATGTGATCCTTAAAGCTAACAGTCCGTCCTGCGGCAGCGGCGTGATTTACAGTGGTGCATTTGACGGCATACTGAAATCCGGCAACGGTGTGGCAACGGCACTGTTTGAGACAAACGGGATCACGGTCTGGCATGAAGACCATCCGGAACTGCCCGCGCTGATTGAACAGCTGTTACAGAACGGAAAAAGCGCATGATAACCCTGACACCCGCCAGTGTGTTAATCCGTGTGCCGGGTTGAAGACCC