Homologs in group_3661

Help

3 homologs were identified in 3 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12840 FBDBKF_12840 98.5 Morganella morganii S1 - Uncharacterized conserved protein
LHKJJB_18955 LHKJJB_18955 100.0 Morganella morganii S3 - Uncharacterized conserved protein
PMI_RS04805 PMI_RS04805 74.4 Proteus mirabilis HI4320 - DUF523 and DUF1722 domain-containing protein

Distribution of the homologs in the orthogroup group_3661

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3661

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24252 4.61e-52 172 49 0 159 4 ybgA Uncharacterized protein YbgA Escherichia coli (strain K12)
Q45584 1.55e-07 53 28 5 146 4 ybbK Uncharacterized protein YbbK Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_19065
Feature type CDS
Gene -
Product Uncharacterized conserved protein
Location 3749 - 4744 (strand: -1)
Length 996 (nucleotides) / 331 (amino acids)

Contig

Accession ZDB_545
Length 23384 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3661
Orthogroup size 4
N. genomes 4

Actions

Genomic region

Domains

PF04463 2-thiouracil desulfurase
PF08349 Protein of unknown function (DUF1722)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3272 Function unknown (S) S Uncharacterized conserved protein YbgA, DUF1722 family

Protein Sequence

MNFLPTSDYMNNTFDKKIPVGISACLLGNSVRFDGGHKRFHFAVDELSDYFEYQSACPEMAIGLPAPRPALRLVKSEEKNVILKFSDGREGDLTQKMVDFSTEYLSKTINLSGYIVCKNSPSCGLERVRVYDSVGNGNKKSGIGLFTEQLLKAMPWLPVEEDGRLSDPHIRENFIIRVFALHELNELKQKSLNRRSLMDFHARYKLLLLAHSQPLYRELGRLVANNKEWNSIESFFIEYRNKFMKLLQNQATRRNHTNVLMHIQGYFKRYLTSNQRQALSKLILEYRQGIQPLLAPLTLITHYLSEYPDNYLNNQRYFNPYPQSLRLRYGL

Flanking regions ( +/- flanking 50bp)

TACTATATATCAGCGTTTTTTTATAATTGATTTCGTATAAGGTGACAAAAATGAATTTTTTACCTACATCTGATTATATGAATAATACTTTTGATAAAAAAATCCCTGTAGGTATTAGTGCTTGCTTATTGGGTAATAGTGTTAGATTTGATGGTGGACATAAGCGCTTTCACTTTGCAGTTGATGAGTTATCAGATTATTTCGAATACCAATCAGCATGCCCTGAGATGGCGATTGGTTTGCCTGCACCCAGACCTGCATTGAGGTTGGTTAAGTCTGAAGAAAAGAACGTTATACTCAAATTCAGTGATGGACGGGAAGGTGATTTAACTCAAAAAATGGTGGATTTCTCTACTGAATATCTGAGCAAAACTATTAATTTATCCGGTTATATTGTTTGTAAAAACTCACCTAGTTGTGGTTTGGAAAGAGTTCGGGTATATGATTCTGTAGGTAATGGCAATAAAAAGTCTGGAATCGGCCTTTTTACTGAGCAATTACTAAAAGCGATGCCGTGGTTGCCGGTTGAGGAAGATGGCAGGTTAAGTGACCCTCATATTCGGGAAAATTTTATTATACGGGTGTTTGCTCTTCATGAACTGAATGAACTAAAGCAAAAATCATTAAATCGTCGCTCATTAATGGATTTTCATGCCCGATACAAACTCCTTTTACTTGCACACTCTCAGCCTCTTTATAGAGAATTAGGCCGTCTCGTTGCTAATAACAAAGAATGGAATTCAATAGAATCATTTTTTATAGAGTATCGAAATAAATTCATGAAACTATTGCAAAATCAAGCAACACGACGCAATCACACTAATGTGCTTATGCATATCCAAGGTTATTTTAAACGCTATTTAACATCAAACCAAAGACAGGCATTAAGTAAATTAATTTTAGAATATCGTCAGGGAATACAGCCTTTATTGGCGCCATTGACATTAATAACGCACTATTTATCTGAGTATCCTGATAACTACCTGAATAACCAAAGGTATTTTAACCCTTACCCTCAATCATTAAGATTGCGTTATGGGTTGTGATATTAAAAATAATACTCTGGTGTTTTGAGAGCGGTTCATATATTCGGCTA