PF03992


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03992, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 26 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03992
Description Antibiotic biosynthesis monooxygenase

Occurence in the database

PF03992 is associated with 26 different proteins (see tab "Protein list" and "Profile")
The 26 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2515 FBDBKF_02165 122504 122803 -1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Morganella morganii S1
1 group_95 FBDBKF_10895 7681 7989 -1 hmoA Heme-degrading monooxygenase HmoA and related ABM domain proteins Morganella morganii S1
2 group_336 FBDBKF_10920 10744 11034 -1 ygiN Quinol monooxygenase YgiN Morganella morganii S1
3 group_95 FBDBKF_20395 2129 2449 1 hmoA Heme-degrading monooxygenase HmoA and related ABM domain proteins Morganella morganii S1
4 group_2515 EHELCC_02635 510324 510623 -1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Morganella morganii S2
5 group_336 EHELCC_05305 48434 48724 1 ygiN Quinol monooxygenase YgiN Morganella morganii S2
6 group_95 EHELCC_05330 51479 51787 1 hmoA Heme-degrading monooxygenase HmoA and related ABM domain proteins Morganella morganii S2
7 group_95 EHELCC_19720 2129 2449 1 hmoA Heme-degrading monooxygenase HmoA and related ABM domain proteins Morganella morganii S2
8 group_2515 NLDBIP_00825 169513 169812 1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Morganella morganii S4
9 group_336 NLDBIP_05625 89499 89789 1 ygiN Quinol monooxygenase YgiN Morganella morganii S4
10 group_95 NLDBIP_05650 92544 92852 1 hmoA Heme-degrading monooxygenase HmoA and related ABM domain proteins Morganella morganii S4
11 group_95 NLDBIP_19700 2129 2449 1 hmoA Heme-degrading monooxygenase HmoA and related ABM domain proteins Morganella morganii S4
12 group_2515 LHKJJB_01210 222873 223172 -1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Morganella morganii S3
13 group_336 LHKJJB_02505 67023 67313 1 ygiN Quinol monooxygenase YgiN Morganella morganii S3
14 group_95 LHKJJB_02530 70068 70376 1 hmoA Heme-degrading monooxygenase HmoA and related ABM domain proteins Morganella morganii S3
15 group_95 LHKJJB_19665 2210 2530 1 hmoA Heme-degrading monooxygenase HmoA and related ABM domain proteins Morganella morganii S3
16 group_2515 HKOGLL_01250 228384 228683 -1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Morganella morganii S5
17 group_336 HKOGLL_15885 90463 90753 1 ygiN Quinol monooxygenase YgiN Morganella morganii S5
18 group_95 HKOGLL_15910 93508 93816 1 hmoA Heme-degrading monooxygenase HmoA and related ABM domain proteins Morganella morganii S5
19 group_95 HKOGLL_19580 2210 2530 1 hmoA Heme-degrading monooxygenase HmoA and related ABM domain proteins Morganella morganii S5
20 group_336 F4V73_RS01635 359508 359795 1 putative quinol monooxygenase Morganella psychrotolerans
21 group_2515 F4V73_RS04535 959204 959503 -1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Morganella psychrotolerans
22 group_336 F4V73_RS08415 1739302 1739592 1 putative quinol monooxygenase Morganella psychrotolerans
23 group_95 F4V73_RS08475 1750579 1750893 1 antibiotic biosynthesis monooxygenase Morganella psychrotolerans
24 group_95 PMI_RS06180 1355851 1356165 1 antibiotic biosynthesis monooxygenase Proteus mirabilis HI4320
25 group_336 PMI_RS06570 1439453 1439755 -1 putative quinol monooxygenase Proteus mirabilis HI4320