Homologs in group_2515

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02165 FBDBKF_02165 100.0 Morganella morganii S1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase
EHELCC_02635 EHELCC_02635 100.0 Morganella morganii S2 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase
NLDBIP_00825 NLDBIP_00825 100.0 Morganella morganii S4 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase
HKOGLL_01250 HKOGLL_01250 100.0 Morganella morganii S5 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase
F4V73_RS04535 F4V73_RS04535 89.9 Morganella psychrotolerans lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase

Distribution of the homologs in the orthogroup group_2515

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2515

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A6TEB3 1.43e-52 162 74 0 98 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
A1JJ50 1.36e-51 160 78 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B1JLQ5 1.5e-51 159 79 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66EZ4 1.5e-51 159 79 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TQM0 1.5e-51 159 79 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pestis (strain Pestoides F)
Q1CN20 1.5e-51 159 79 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pestis bv. Antiqua (strain Nepal516)
A9R0S7 1.5e-51 159 79 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pestis bv. Antiqua (strain Angola)
Q7CG46 1.5e-51 159 79 0 96 1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pestis
B2K3F6 1.5e-51 159 79 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C133 1.5e-51 159 79 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pestis bv. Antiqua (strain Antiqua)
A7FMK2 1.5e-51 159 79 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A4WEQ9 5.23e-51 158 75 0 97 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Enterobacter sp. (strain 638)
Q8Z2Y0 6.05e-50 155 77 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Salmonella typhi
A9MZG6 6.05e-50 155 77 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJE2 6.05e-50 155 77 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57HD8 6.05e-50 155 77 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Salmonella choleraesuis (strain SC-B67)
Q8ZKP9 8.79e-50 155 77 0 96 2 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B1LF97 6.06e-49 153 76 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli (strain SMS-3-5 / SECEC)
P64461 6.06e-49 153 76 0 96 1 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli (strain K12)
B1IRU2 6.06e-49 153 76 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B1XEA6 6.06e-49 153 76 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli (strain K12 / DH10B)
P64462 6.06e-49 153 76 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli O157:H7
Q83L16 2.5e-48 151 75 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Shigella flexneri
Q0T4L3 2.5e-48 151 75 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Shigella flexneri serotype 5b (strain 8401)
A8A071 1.12e-47 150 75 0 96 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Escherichia coli O9:H4 (strain HS)
Q7N2D5 8.12e-47 148 69 0 99 3 lsrG (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
P73602 5.42e-08 50 32 0 84 3 sll1783 Uncharacterized protein sll1783 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P94425 5.78e-07 47 32 0 78 1 ycnE Putative monooxygenase YcnE Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_01210
Feature type CDS
Gene lsrG
Product (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase
Location 222873 - 223172 (strand: -1)
Length 300 (nucleotides) / 99 (amino acids)

Contig

Accession ZDB_359
Length 392768 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2515
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF03992 Antibiotic biosynthesis monooxygenase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1359 Energy production and conversion (C) C Quinol monooxygenase YgiN

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11530 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] Quorum sensing -

Protein Sequence

MNVTLVEINVKPGKVDEFIAVFRENHLGSIKEPGNLRFDVLQDPEVETRFYIYEAYADDAAVAAHKKTPHYLQCVEKLEDLMTGPRKKTVFIGLMPEVK

Flanking regions ( +/- flanking 50bp)

CCGCACAGGCTTATCAGCTGTTCCTGAGCGAAAAGAACAAGGGGTAAATTTTGAACGTAACATTAGTGGAAATTAATGTGAAACCCGGCAAAGTGGATGAATTTATTGCCGTTTTCCGTGAAAACCATCTGGGATCGATAAAAGAGCCCGGTAACCTGCGTTTTGATGTGTTACAGGACCCGGAAGTGGAAACCCGCTTTTATATCTATGAAGCCTATGCCGATGATGCAGCCGTGGCGGCACATAAGAAAACCCCGCACTATTTACAGTGCGTGGAAAAGCTGGAAGACCTGATGACCGGTCCGCGTAAGAAAACAGTCTTTATCGGGCTGATGCCGGAAGTGAAATAATCCTTTCCTGTTATCTGAAAAACCTGCTGCGGCAGGTTTTTTTATTGCCC