PF03974


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03974, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03974
Description Ecotin

Occurence in the database

PF03974 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1654 FBDBKF_10990 20385 20909 1 eco serine protease inhibitor ecotin Morganella morganii S1
1 group_1654 EHELCC_05235 38559 39083 -1 eco serine protease inhibitor ecotin Morganella morganii S2
2 group_1654 NLDBIP_05555 79624 80148 -1 eco serine protease inhibitor ecotin Morganella morganii S4
3 group_1654 LHKJJB_02435 57148 57672 -1 eco serine protease inhibitor ecotin Morganella morganii S3
4 group_1654 HKOGLL_15815 80588 81112 -1 eco serine protease inhibitor ecotin Morganella morganii S5
5 group_1654 F4V73_RS08235 1712074 1712637 -1 eco serine protease inhibitor ecotin Morganella psychrotolerans
6 group_1654 PMI_RS09635 2104940 2105419 -1 eco serine protease inhibitor ecotin Proteus mirabilis HI4320