PF03446


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03446, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03446
Description NAD binding domain of 6-phosphogluconate dehydrogenase

Occurence in the database

PF03446 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1190 FBDBKF_06870 37974 39386 -1 gndA NADP-dependent phosphogluconate dehydrogenase Morganella morganii S1
1 group_1190 EHELCC_04100 146800 148212 1 gndA NADP-dependent phosphogluconate dehydrogenase Morganella morganii S2
2 group_1190 NLDBIP_04100 146596 148008 1 gndA NADP-dependent phosphogluconate dehydrogenase Morganella morganii S4
3 group_1190 LHKJJB_09930 146710 148122 1 gndA NADP-dependent phosphogluconate dehydrogenase Morganella morganii S3
4 group_1190 HKOGLL_09045 42930 44342 -1 gndA NADP-dependent phosphogluconate dehydrogenase Morganella morganii S5
5 group_1190 F4V73_RS01015 215851 217263 -1 gndA NADP-dependent phosphogluconate dehydrogenase Morganella psychrotolerans
6 group_1190 PMI_RS03225 713406 714812 1 gndA NADP-dependent phosphogluconate dehydrogenase Proteus mirabilis HI4320