PF03441


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03441, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03441
Description FAD binding domain of DNA photolyase

Occurence in the database

PF03441 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1614 FBDBKF_10635 90946 92385 -1 phrB deoxyribodipyrimidine photo-lyase Morganella morganii S1
1 group_1614 EHELCC_14970 90936 92375 -1 phrB deoxyribodipyrimidine photo-lyase Morganella morganii S2
2 group_1614 NLDBIP_14800 90936 92375 -1 phrB deoxyribodipyrimidine photo-lyase Morganella morganii S4
3 group_1614 LHKJJB_14545 49351 50790 1 phrB deoxyribodipyrimidine photo-lyase Morganella morganii S3
4 group_1614 HKOGLL_13165 49351 50790 1 phrB deoxyribodipyrimidine photo-lyase Morganella morganii S5
5 group_1614 F4V73_RS14345 93432 94865 -1 phrB deoxyribodipyrimidine photo-lyase Morganella psychrotolerans
6 group_1614 PMI_RS15965 3546054 3547484 -1 phrB deoxyribodipyrimidine photo-lyase Proteus mirabilis HI4320