PF03230


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03230, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03230
Description Antirestriction protein

Occurence in the database

PF03230 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_99 FBDBKF_16655 14579 15019 1 Antirestriction protein Morganella morganii S1
1 group_99 FBDBKF_18010 1845 2285 1 Antirestriction protein Morganella morganii S1
2 group_99 FBDBKF_19875 871 1299 1 Antirestriction protein Morganella morganii S1
3 group_99 EHELCC_07740 14123 14551 -1 Antirestriction protein Morganella morganii S2
4 group_99 EHELCC_16710 1845 2285 1 Antirestriction protein Morganella morganii S2
5 group_99 NLDBIP_08065 14123 14551 -1 Antirestriction protein Morganella morganii S4
6 group_99 NLDBIP_17740 53481 53921 -1 Antirestriction protein Morganella morganii S4
7 group_99 LHKJJB_06200 242608 243036 1 Antirestriction protein Morganella morganii S3
8 group_99 LHKJJB_17660 53481 53921 -1 Antirestriction protein Morganella morganii S3
9 group_99 HKOGLL_17475 53481 53921 -1 Antirestriction protein Morganella morganii S5
10 group_99 HKOGLL_19055 877 1305 1 Antirestriction protein Morganella morganii S5
11 group_99 PMI_RS17350 3809732 3810157 1 antirestriction protein Proteus mirabilis HI4320