PF02861


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02861, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02861
Description Clp amino terminal domain, pathogenicity island component

Occurence in the database

PF02861 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1214 FBDBKF_07065 76459 78744 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S1
1 group_2052 FBDBKF_15370 81826 84399 1 clpB ATP-dependent chaperone ClpB Morganella morganii S1
2 group_1214 EHELCC_03905 107442 109727 -1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S2
3 group_2052 EHELCC_10875 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S2
4 group_1214 NLDBIP_03905 107238 109523 -1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S4
5 group_2052 NLDBIP_11220 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S4
6 group_1214 LHKJJB_09735 107352 109637 -1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S3
7 group_2052 LHKJJB_11080 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S3
8 group_1214 HKOGLL_09240 81415 83700 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S5
9 group_2052 HKOGLL_09690 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S5
10 group_1214 F4V73_RS01250 264241 266526 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella psychrotolerans
11 group_2052 F4V73_RS12085 553 3126 -1 clpB ATP-dependent chaperone ClpB Morganella psychrotolerans
12 group_2052 PMI_RS01920 449810 452386 1 clpB ATP-dependent chaperone ClpB Proteus mirabilis HI4320
13 group_1214 PMI_RS03395 749183 751477 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Proteus mirabilis HI4320