PF02852


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02852, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 28 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02852
Description Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

Occurence in the database

PF02852 is associated with 28 different proteins (see tab "Protein list" and "Profile")
The 28 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_838 FBDBKF_04225 30969 32396 -1 lpdA dihydrolipoyl dehydrogenase Morganella morganii S1
1 group_1710 FBDBKF_11930 34077 35429 -1 gorA glutathione-disulfide reductase Morganella morganii S1
2 group_1742 FBDBKF_12145 84046 85446 1 sthA Si-specific NAD(P)(+) transhydrogenase Morganella morganii S1
3 group_2091 FBDBKF_15710 75773 77419 -1 merA mercury(II) reductase Morganella morganii S1
4 group_2091 FBDBKF_20225 2770 3312 -1 merA MerA Morganella morganii S1
5 group_838 EHELCC_05515 90426 91853 -1 lpdA dihydrolipoyl dehydrogenase Morganella morganii S2
6 group_1742 EHELCC_14160 49259 50659 -1 sthA Si-specific NAD(P)(+) transhydrogenase Morganella morganii S2
7 group_1710 EHELCC_14375 99276 100628 1 gorA glutathione-disulfide reductase Morganella morganii S2
8 group_2091 EHELCC_16065 75073 76719 -1 merA mercury(II) reductase Morganella morganii S2
9 group_2091 EHELCC_19590 2770 3312 -1 merA MerA Morganella morganii S2
10 group_838 NLDBIP_05835 131491 132918 -1 lpdA dihydrolipoyl dehydrogenase Morganella morganii S4
11 group_1742 NLDBIP_15255 53196 54596 -1 sthA Si-specific NAD(P)(+) transhydrogenase Morganella morganii S4
12 group_1710 NLDBIP_15470 103213 104565 1 gorA glutathione-disulfide reductase Morganella morganii S4
13 group_2091 NLDBIP_16300 3944 5590 1 merA mercury(II) reductase Morganella morganii S4
14 group_838 LHKJJB_02715 109015 110442 -1 lpdA dihydrolipoyl dehydrogenase Morganella morganii S3
15 group_1710 LHKJJB_15140 34077 35429 -1 gorA glutathione-disulfide reductase Morganella morganii S3
16 group_1742 LHKJJB_15355 84046 85446 1 sthA Si-specific NAD(P)(+) transhydrogenase Morganella morganii S3
17 group_2091 LHKJJB_16500 75073 76719 -1 merA mercury(II) reductase Morganella morganii S3
18 group_838 HKOGLL_06190 30879 32306 -1 lpdA dihydrolipoyl dehydrogenase Morganella morganii S5
19 group_1710 HKOGLL_14260 20740 22092 -1 gorA glutathione-disulfide reductase Morganella morganii S5
20 group_1742 HKOGLL_14475 70709 72109 1 sthA Si-specific NAD(P)(+) transhydrogenase Morganella morganii S5
21 group_2091 HKOGLL_16270 75073 76719 -1 merA mercury(II) reductase Morganella morganii S5
22 group_838 F4V73_RS08675 1792037 1793464 -1 lpdA dihydrolipoyl dehydrogenase Morganella psychrotolerans
23 group_1710 F4V73_RS14735 182346 183698 1 gorA glutathione-disulfide reductase Morganella psychrotolerans
24 group_1742 F4V73_RS16940 9302 10702 1 sthA Si-specific NAD(P)(+) transhydrogenase Morganella psychrotolerans
25 group_838 PMI_RS10075 2199158 2200585 -1 lpdA dihydrolipoyl dehydrogenase Proteus mirabilis HI4320
26 group_1710 PMI_RS14005 3109392 3110744 -1 gorA glutathione-disulfide reductase Proteus mirabilis HI4320
27 group_1742 PMI_RS16030 3562641 3564038 -1 sthA Si-specific NAD(P)(+) transhydrogenase Proteus mirabilis HI4320