PF02767


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02767, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02767
Description DNA polymerase III beta subunit, central domain

Occurence in the database

PF02767 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2082 FBDBKF_15580 45965 47065 -1 dnaN DNA polymerase III subunit beta Morganella morganii S1
1 group_2082 EHELCC_15940 45265 46365 -1 dnaN DNA polymerase III subunit beta Morganella morganii S2
2 group_2082 NLDBIP_16430 34298 35398 1 dnaN DNA polymerase III subunit beta Morganella morganii S4
3 group_2082 LHKJJB_16375 45265 46365 -1 dnaN DNA polymerase III subunit beta Morganella morganii S3
4 group_2082 HKOGLL_16145 45265 46365 -1 dnaN DNA polymerase III subunit beta Morganella morganii S5
5 group_2082 F4V73_RS17580 150979 152079 1 dnaN DNA polymerase III subunit beta Morganella psychrotolerans
6 group_2082 PMI_RS15505 3447225 3448328 1 dnaN DNA polymerase III subunit beta Proteus mirabilis HI4320