PF02678


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02678, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 28 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02678
Description Pirin

Occurence in the database

PF02678 is associated with 28 different proteins (see tab "Protein list" and "Profile")
The 28 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_705 FBDBKF_03050 10007 10705 1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S1
1 group_260 FBDBKF_04475 89093 89974 1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S1
2 group_2672 FBDBKF_04865 178651 179544 -1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S1
3 group_1587 FBDBKF_10355 25299 25997 1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S1
4 group_260 EHELCC_05765 148550 149431 1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S2
5 group_2672 EHELCC_06155 238108 239001 -1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S2
6 group_705 EHELCC_07485 236398 237096 -1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S2
7 group_1587 EHELCC_14690 25289 25987 1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S2
8 group_260 NLDBIP_06085 189615 190496 1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S4
9 group_2672 NLDBIP_06475 279173 280066 -1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S4
10 group_705 NLDBIP_07810 236271 236969 -1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S4
11 group_1587 NLDBIP_14520 25289 25987 1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S4
12 group_260 LHKJJB_02965 167139 168020 1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S3
13 group_2672 LHKJJB_03355 256697 257590 -1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S3
14 group_705 LHKJJB_07345 200017 200715 -1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S3
15 group_1587 LHKJJB_14825 115739 116437 -1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S3
16 group_705 HKOGLL_03585 32672 33370 1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S5
17 group_260 HKOGLL_06440 89003 89884 1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S5
18 group_2672 HKOGLL_06830 178561 179454 -1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S5
19 group_1587 HKOGLL_13445 115739 116437 -1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily Morganella morganii S5
20 group_260 F4V73_RS08935 1854832 1855722 1 pirin family protein Morganella psychrotolerans
21 group_2672 F4V73_RS09445 1991818 1992726 -1 pirin family protein Morganella psychrotolerans
22 group_705 F4V73_RS11870 528590 529288 -1 pirin family protein Morganella psychrotolerans
23 group_1587 F4V73_RS14050 21524 22222 1 pirin family protein Morganella psychrotolerans
24 group_260 PMI_RS10860 2393149 2394024 1 pirin family protein Proteus mirabilis HI4320
25 group_1587 PMI_RS14910 3308737 3309438 1 pirin family protein Proteus mirabilis HI4320
26 group_260 PMI_RS17240 3784985 3785854 -1 pirin family protein Proteus mirabilis HI4320
27 group_705 PMI_RS18380 4033938 4034642 -1 pirin family protein Proteus mirabilis HI4320