Homologs in group_243

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04475 FBDBKF_04475 51.6 Morganella morganii S1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
EHELCC_05765 EHELCC_05765 51.6 Morganella morganii S2 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
NLDBIP_06085 NLDBIP_06085 51.6 Morganella morganii S4 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
LHKJJB_02965 LHKJJB_02965 51.6 Morganella morganii S3 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
HKOGLL_06440 HKOGLL_06440 51.6 Morganella morganii S5 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
F4V73_RS08935 F4V73_RS08935 52.6 Morganella psychrotolerans - pirin family protein
PMI_RS10860 PMI_RS10860 50.5 Proteus mirabilis HI4320 - pirin family protein

Distribution of the homologs in the orthogroup group_243

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_243

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9I163 1.99e-106 313 52 1 283 3 PA2418 Putative quercetin 2,3-dioxygenase PA2418 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9SEE4 4.23e-50 170 38 4 260 2 None Pirin-like protein Solanum lycopersicum
Q9LX49 2.48e-49 168 39 5 235 1 PRN1 Pirin-1 Arabidopsis thaliana
Q9LX45 1.76e-47 162 35 8 276 3 At3g59260 Putative pirin-like protein At3g59260 Arabidopsis thaliana
Q9ZW82 3.64e-46 160 36 5 257 1 PRN2 Pirin-like protein 2 Arabidopsis thaliana
Q9HLU2 5.03e-46 158 34 5 242 3 Ta0133 Putative quercetin 2,3-dioxygenase Ta0133 Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Q9LPS9 1.22e-45 159 35 6 262 2 At1g50590 Pirin-like protein At1g50590 Arabidopsis thaliana
P58112 3.8e-45 157 34 7 287 3 CC_0481 Pirin-like protein CC_0481 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q9HZ00 6.75e-44 154 35 10 288 3 PA3240 Putative quercetin 2,3-dioxygenase PA3240 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q5M827 1.64e-42 150 36 9 256 1 Pir Pirin Rattus norvegicus
O00625 1.01e-41 148 35 9 256 1 PIR Pirin Homo sapiens
Q9D711 2.7e-41 147 36 9 256 1 Pir Pirin Mus musculus
Q9KKY1 8.8e-41 145 34 9 290 3 VC_A0969 Putative quercetin 2,3-dioxygenase VC_A0969 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P58114 6.18e-25 103 27 9 254 3 CC_3178 Pirin-like protein CC_3178 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q9I4D3 6.01e-18 85 28 9 275 3 PA1205 Putative quercetin 2,3-dioxygenase PA1205 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9I4C8 1.31e-14 74 27 6 192 3 PA1210 Putative quercetin 2,3-dioxygenase PA1210 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9XBR7 2.67e-12 68 26 6 198 3 ZMO1337 Putative quercetin 2,3-dioxygenase ZMO1337 Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
P73623 1.64e-10 63 24 9 240 3 sll1773 Putative quercetin 2,3-dioxygenase sll1773 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P46852 3.25e-10 62 25 6 202 1 yhhW Quercetin 2,3-dioxygenase Escherichia coli (strain K12)
P58116 5.42e-10 61 25 6 202 3 yhhW Quercetin 2,3-dioxygenase Escherichia coli O157:H7
P65725 1.27e-08 57 31 6 160 3 BQ2027_MB0187C Putative quercetin 2,3-dioxygenase Mb0187c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WI85 1.27e-08 57 31 6 160 1 Rv0181c Putative quercetin 2,3-dioxygenase Rv0181c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WI84 1.27e-08 57 31 6 160 3 MT0190 Putative quercetin 2,3-dioxygenase MT0190 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P58113 4.53e-08 56 23 6 192 3 CC_1473 Pirin-like protein CC_1473 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q9CKD7 1.2e-05 48 24 11 258 3 PM1685 Putative quercetin 2,3-dioxygenase PM1685 Pasteurella multocida (strain Pm70)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17240
Feature type CDS
Gene -
Product pirin family protein
Location 3784985 - 3785854 (strand: -1)
Length 870 (nucleotides) / 289 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_243
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF02678 Pirin
PF05726 Pirin C-terminal cupin domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1741 General function prediction only (R) R Redox-sensitive bicupin YhaK, pirin superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06911 quercetin 2,3-dioxygenase [EC:1.13.11.24] - -

Protein Sequence

MTMRQVKQIYSAPNPHWVGNGFSMSTVFSYKENAEQYSPFLLMDYAEPTLFKPVTNARGVGTHPHRGFETVTIAYQGEVSHHDSTGHAGTIAEGDVQWMTAASGILHKEYHSEKMTKEGGMLEVVQLWVNLPSAYKMAQPRYQALKAQDIPHVQLPNAQGYVRVIAGDYANTSGIAMTYSPVNLWDVRLNHAGTSHYAIPEGHNAMLFVVKGAIHLNNSDIVRQHEIAILDTHGDTLTLGSMGDAIVLILTGEPINEPVVGQGPFVMNTQQELLQAFDDYDNGKFGMMD

Flanking regions ( +/- flanking 50bp)

CTTCTGTGTCTGGGTTATTGCGGTTTCTTTCCTTAATCAGGAGAAACATCATGACAATGAGACAGGTAAAACAAATTTATTCAGCACCTAATCCACATTGGGTTGGTAATGGCTTTTCTATGAGCACAGTATTCTCTTATAAAGAGAATGCAGAGCAATATAGCCCATTCTTATTAATGGATTATGCTGAGCCTACATTATTTAAGCCTGTTACTAATGCGCGTGGTGTTGGGACTCATCCCCACCGTGGATTCGAAACGGTCACTATAGCTTATCAAGGCGAAGTGTCTCACCATGATTCTACCGGTCATGCCGGTACAATTGCTGAAGGTGATGTGCAGTGGATGACAGCCGCTTCAGGTATTTTACATAAAGAATATCACTCTGAAAAAATGACGAAAGAGGGAGGTATGCTTGAAGTCGTACAACTGTGGGTTAATTTGCCAAGCGCGTATAAAATGGCACAACCCCGTTATCAAGCACTAAAAGCGCAAGATATTCCTCATGTGCAATTACCTAATGCACAGGGCTATGTCCGAGTCATTGCCGGTGACTATGCAAATACATCTGGTATTGCTATGACCTATTCCCCTGTAAACCTGTGGGATGTGCGCTTAAATCATGCGGGTACTTCACACTATGCTATCCCTGAGGGACATAATGCGATGCTATTTGTCGTTAAAGGTGCGATACATCTCAATAACAGTGATATTGTACGTCAACATGAAATCGCAATATTAGATACCCACGGTGATACCCTAACATTAGGATCCATGGGAGACGCTATCGTATTAATATTAACGGGTGAGCCCATTAATGAGCCAGTAGTAGGACAAGGGCCTTTTGTCATGAATACACAACAAGAGTTATTACAAGCTTTTGATGACTATGACAATGGTAAGTTTGGTATGATGGATTAGCCATTTAAAAAATACCCGTCACAAAAAGAATTTGTGGCGGGTGTTCTTTT