Homologs in group_260

Help

7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_05765 EHELCC_05765 100.0 Morganella morganii S2 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
NLDBIP_06085 NLDBIP_06085 100.0 Morganella morganii S4 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
LHKJJB_02965 LHKJJB_02965 100.0 Morganella morganii S3 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
HKOGLL_06440 HKOGLL_06440 100.0 Morganella morganii S5 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
F4V73_RS08935 F4V73_RS08935 88.3 Morganella psychrotolerans - pirin family protein
PMI_RS10860 PMI_RS10860 70.3 Proteus mirabilis HI4320 - pirin family protein
PMI_RS17240 PMI_RS17240 51.6 Proteus mirabilis HI4320 - pirin family protein

Distribution of the homologs in the orthogroup group_260

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_260

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9I163 6.44e-113 330 57 3 287 3 PA2418 Putative quercetin 2,3-dioxygenase PA2418 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P58112 7.74e-44 153 38 9 274 3 CC_0481 Pirin-like protein CC_0481 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q9ZW82 6.27e-42 150 36 7 280 1 PRN2 Pirin-like protein 2 Arabidopsis thaliana
Q9LPS9 2.56e-39 142 35 8 271 2 At1g50590 Pirin-like protein At1g50590 Arabidopsis thaliana
Q9HZ00 1.8e-38 140 36 8 265 3 PA3240 Putative quercetin 2,3-dioxygenase PA3240 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9SEE4 4.95e-38 139 35 5 260 2 None Pirin-like protein Solanum lycopersicum
Q9LX45 5.27e-38 138 35 7 265 3 At3g59260 Putative pirin-like protein At3g59260 Arabidopsis thaliana
Q9KKY1 3.65e-37 136 35 11 283 3 VC_A0969 Putative quercetin 2,3-dioxygenase VC_A0969 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9D711 8.24e-37 135 35 9 271 1 Pir Pirin Mus musculus
Q9LX49 8.91e-37 135 34 5 258 1 PRN1 Pirin-1 Arabidopsis thaliana
Q5M827 1e-36 135 35 8 265 1 Pir Pirin Rattus norvegicus
O00625 1.03e-36 135 33 7 263 1 PIR Pirin Homo sapiens
Q9HLU2 2.39e-35 131 30 8 250 3 Ta0133 Putative quercetin 2,3-dioxygenase Ta0133 Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
P58114 2.44e-31 121 32 9 273 3 CC_3178 Pirin-like protein CC_3178 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q9I4D3 1.58e-22 98 30 9 281 3 PA1205 Putative quercetin 2,3-dioxygenase PA1205 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9XBR7 2.2e-13 71 29 6 203 3 ZMO1337 Putative quercetin 2,3-dioxygenase ZMO1337 Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Q9I4C8 8.11e-11 64 30 8 200 3 PA1210 Putative quercetin 2,3-dioxygenase PA1210 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P73623 2.74e-10 62 27 7 190 3 sll1773 Putative quercetin 2,3-dioxygenase sll1773 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P46852 3.35e-09 59 27 8 207 1 yhhW Quercetin 2,3-dioxygenase Escherichia coli (strain K12)
P58116 5.05e-09 58 27 8 207 3 yhhW Quercetin 2,3-dioxygenase Escherichia coli O157:H7
P58113 1.48e-08 57 26 4 198 3 CC_1473 Pirin-like protein CC_1473 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P65725 5.49e-08 56 37 2 96 3 BQ2027_MB0187C Putative quercetin 2,3-dioxygenase Mb0187c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WI85 5.49e-08 56 37 2 96 1 Rv0181c Putative quercetin 2,3-dioxygenase Rv0181c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WI84 5.49e-08 56 37 2 96 3 MT0190 Putative quercetin 2,3-dioxygenase MT0190 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q9CKD7 6.48e-05 47 24 6 163 3 PM1685 Putative quercetin 2,3-dioxygenase PM1685 Pasteurella multocida (strain Pm70)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_04475
Feature type CDS
Gene yhaK
Product Redox-sensitive bicupin YhaK, pirin superfamily
Location 89093 - 89974 (strand: 1)
Length 882 (nucleotides) / 293 (amino acids)

Contig

Accession contig_4
Length 199551 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_260
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF02678 Pirin
PF05726 Pirin C-terminal cupin domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1741 General function prediction only (R) R Redox-sensitive bicupin YhaK, pirin superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06911 quercetin 2,3-dioxygenase [EC:1.13.11.24] - -

Protein Sequence

MRNIIGTYRAPKGHWVGDGFPVSQMFSYSNHGKHLNPFILLDRAGPADFPPSEGANRGVGEHPHRGFETVTIVYEGEVAHHDSTGQGGVIGKGDVQWMTAASGILHQEYHSDRFMREGGTLDMVQLWVNLPASAKSAAPGYQLLENNAIPAVALPNDAGTLRVIAGEYAGARGPARTFTEMDVWDLRLKAGKVTGLAAKASRNAGLIVLHGSIYVDSRAPLHTGELMILDGTDSTDSTILLEATEDAVVLFLSGEPIDEPVVGYGPFVMNSEQEIREAIEDFNSGRFGHIPAE

Flanking regions ( +/- flanking 50bp)

TAGTTCGCGCCCTTATTATCTGTTTATACATAATTATCAGGAGAGACATCATGAGAAACATTATCGGCACCTACCGCGCACCGAAAGGCCATTGGGTCGGCGACGGATTTCCGGTCAGCCAGATGTTTTCCTACAGCAATCACGGCAAACATCTGAACCCGTTTATTCTGCTCGACCGTGCCGGTCCTGCGGATTTCCCGCCATCAGAAGGCGCCAACCGGGGAGTTGGTGAGCACCCGCACCGCGGCTTTGAAACCGTAACTATCGTCTATGAAGGCGAGGTGGCTCACCATGACTCCACCGGTCAGGGCGGCGTGATCGGTAAAGGTGATGTGCAGTGGATGACTGCGGCATCCGGTATTCTGCATCAGGAATACCATTCTGACCGCTTTATGCGGGAAGGCGGCACGCTGGATATGGTGCAGTTGTGGGTGAATCTGCCTGCTTCCGCAAAATCCGCCGCACCGGGTTATCAGTTACTGGAAAATAACGCCATTCCGGCAGTGGCACTGCCGAATGACGCCGGGACATTACGGGTGATCGCCGGAGAATATGCCGGAGCACGCGGTCCGGCCCGGACCTTCACGGAAATGGATGTGTGGGATCTGCGCCTGAAAGCCGGAAAAGTCACCGGACTGGCGGCAAAAGCCAGCCGCAACGCCGGACTGATCGTTCTGCACGGCAGTATTTATGTCGACAGCCGCGCACCACTGCACACCGGCGAGCTGATGATCCTGGACGGCACTGACAGCACTGACAGCACCATTCTGCTGGAAGCCACCGAAGATGCGGTTGTCCTGTTCCTCAGCGGCGAGCCGATTGATGAGCCGGTTGTCGGTTACGGCCCGTTTGTGATGAACAGCGAGCAGGAAATCCGCGAAGCCATTGAGGATTTCAACAGCGGCCGTTTCGGACATATCCCCGCTGAGTAAGGCAGATGAGGCAAATACGACCGCTATTTGCCTCACAAAATGAGGCGAAT