PF02674


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02674, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02674
Description Colicin V production protein

Occurence in the database

PF02674 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1911 FBDBKF_14240 47995 48501 -1 cvpA colicin V production protein Morganella morganii S1
1 group_1911 EHELCC_08040 68484 68990 1 cvpA colicin V production protein Morganella morganii S2
2 group_1911 NLDBIP_08365 68484 68990 1 cvpA colicin V production protein Morganella morganii S4
3 group_1911 LHKJJB_05900 188169 188675 -1 cvpA colicin V production protein Morganella morganii S3
4 group_1911 HKOGLL_05015 53075 53581 1 cvpA colicin V production protein Morganella morganii S5
5 group_1911 F4V73_RS02670 562053 562559 1 cvpA colicin V production protein Morganella psychrotolerans
6 group_1911 PMI_RS08750 1914378 1914869 -1 cvpA colicin V production protein Proteus mirabilis HI4320