PF02667


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02667, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02667
Description Short chain fatty acid transporter

Occurence in the database

PF02667 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1612 FBDBKF_10605 82104 83426 1 atoE Short chain fatty acids transporter Morganella morganii S1
1 group_1612 EHELCC_14940 82094 83416 1 atoE Short chain fatty acids transporter Morganella morganii S2
2 group_1612 NLDBIP_14770 82094 83416 1 atoE Short chain fatty acids transporter Morganella morganii S4
3 group_1612 LHKJJB_14575 58310 59632 -1 atoE Short chain fatty acids transporter Morganella morganii S3
4 group_1612 HKOGLL_13195 58310 59632 -1 atoE Short chain fatty acids transporter Morganella morganii S5
5 group_1612 F4V73_RS14315 84652 85974 1 TIGR00366 family protein Morganella psychrotolerans