Homologs in group_2868

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10605 FBDBKF_10605 100.0 Morganella morganii S1 atoE Short chain fatty acids transporter
EHELCC_14940 EHELCC_14940 100.0 Morganella morganii S2 atoE Short chain fatty acids transporter
NLDBIP_14770 NLDBIP_14770 100.0 Morganella morganii S4 atoE Short chain fatty acids transporter
HKOGLL_13195 HKOGLL_13195 100.0 Morganella morganii S5 atoE Short chain fatty acids transporter
F4V73_RS14315 F4V73_RS14315 89.8 Morganella psychrotolerans - TIGR00366 family protein

Distribution of the homologs in the orthogroup group_2868

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2868

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76460 0 754 83 0 440 1 atoE Putative short-chain fatty acid transporter Escherichia coli (strain K12)
P44051 0 687 73 1 446 4 atoE Putative short-chain fatty acid transporter Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_14575
Feature type CDS
Gene atoE
Product Short chain fatty acids transporter
Location 58310 - 59632 (strand: -1)
Length 1323 (nucleotides) / 440 (amino acids)
In genomic island -

Contig

Accession ZDB_372
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2868
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF02667 Short chain fatty acid transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2031 Lipid transport and metabolism (I) I Short chain fatty acids transporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02106 short-chain fatty acids transporter Two-component system -

Protein Sequence

MIGRISRVMTRVVSRYLPDPLIFAMLLTMLTFIIALALTPSTPMDLVNLWGNGFWNLLAFGMQMALIIVTGHALASSPPVKRILRLTASLAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFMTWGGGFSGSMPLLAATPGNPVEHIAGLIPVSQTMFTGYNLFITLTLILVMPFVTRMMMPRKDDIMMIDPALLEEEPDFQKKLPEDAPVSLRMEESRLIAWIIGILGFTFLGMYFIKNGFNITINTVNMIFLLTGLLLHKTPMAYMRAVSAAARSTAGILVQFPFYAGIQLMMEGSGLGGLITEFFINVANKETFPLMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLLSAPIFIIGLAFF

Flanking regions ( +/- flanking 50bp)

GTGTCACCGGCAATCTGTGAAATGCCGCTGGTGACTGCGGGGGAAGCCGTATGATAGGACGCATCTCACGAGTCATGACCCGTGTGGTGAGCCGCTATCTGCCGGATCCGCTGATCTTCGCAATGCTGCTGACCATGCTGACGTTTATCATCGCGCTGGCACTCACACCAAGCACACCAATGGATCTGGTGAACTTATGGGGGAACGGATTCTGGAACCTGCTGGCGTTCGGGATGCAGATGGCGCTGATCATCGTGACCGGTCACGCGCTGGCCAGCTCCCCGCCGGTTAAACGTATTCTGCGGCTGACTGCCTCACTGGCAAAAACCCCGGTTCAGGGGGTGATGCTGGTGACGTTTTTCGGTTCGGTTGCCTGTGTCATTAACTGGGGATTCGGCCTGGTGGTCGGGGCGATGTTTGCCCGCGAAGTGGCCCGCCGTGTACCGGGCTCTGACTACCCGCTGCTGATCGCCTGTGCCTATATCGGGTTTATGACCTGGGGCGGCGGTTTCTCCGGCTCTATGCCGCTGCTGGCCGCCACACCGGGTAACCCTGTCGAGCATATCGCCGGGCTTATTCCTGTCAGCCAGACCATGTTCACCGGGTATAACCTGTTTATCACCCTGACACTGATTCTGGTGATGCCGTTTGTCACCCGCATGATGATGCCGCGCAAAGACGACATCATGATGATCGACCCTGCGCTGCTCGAAGAAGAGCCGGATTTCCAGAAAAAATTACCGGAAGACGCGCCGGTTTCTCTCCGGATGGAAGAAAGCCGCCTTATCGCATGGATTATCGGGATTCTGGGCTTCACGTTCCTCGGCATGTATTTCATCAAAAACGGTTTCAACATCACCATTAACACCGTGAATATGATTTTCCTGCTGACCGGTCTGCTGCTGCATAAAACCCCGATGGCGTATATGCGTGCCGTCAGTGCCGCCGCCCGCAGTACCGCCGGGATCCTCGTGCAGTTCCCGTTCTATGCCGGTATCCAGCTCATGATGGAAGGCTCCGGACTGGGCGGGCTTATCACTGAATTCTTTATCAACGTCGCCAACAAAGAAACCTTCCCGCTGATGACGTTCTTCAGCTCTGCGCTGATCAACTTTGCCGTGCCGTCAGGCGGCGGTCACTGGGTGATTCAGGGGCCGTTTGTTATTCCGGCTGCCCAGGCGCTGGGGGCTGATCTCGGTAAGTCCGTGATGGCGATTGCCTACGGTGAACAGTGGATGAACATGGCGCAGCCGTTCTGGGCGCTTCCTGCACTGGCGATCGCCGGGCTGGGGGTCAGGGACATTATGGGGTACTGCATCACCGCCCTGCTGCTCTCGGCACCGATTTTCATTATCGGCCTCGCTTTCTTCTGACAGATACTAAACAGTAAGGATTTCGCAATGGAAAATATCGTTATTGTCAG