Homologs in group_1612

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10605 FBDBKF_10605 100.0 Morganella morganii S1 atoE Short chain fatty acids transporter
EHELCC_14940 EHELCC_14940 100.0 Morganella morganii S2 atoE Short chain fatty acids transporter
NLDBIP_14770 NLDBIP_14770 100.0 Morganella morganii S4 atoE Short chain fatty acids transporter
LHKJJB_14575 LHKJJB_14575 100.0 Morganella morganii S3 atoE Short chain fatty acids transporter
F4V73_RS14315 F4V73_RS14315 89.8 Morganella psychrotolerans - TIGR00366 family protein
PMI_RS15250 PMI_RS15250 26.6 Proteus mirabilis HI4320 - AbgT family transporter

Distribution of the homologs in the orthogroup group_1612

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1612

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76460 0 754 83 0 440 1 atoE Putative short-chain fatty acid transporter Escherichia coli (strain K12)
P44051 0 687 73 1 446 4 atoE Putative short-chain fatty acid transporter Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_13195
Feature type CDS
Gene atoE
Product Short chain fatty acids transporter
Location 58310 - 59632 (strand: -1)
Length 1323 (nucleotides) / 440 (amino acids)

Contig

Accession ZDB_691
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1612
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02667 Short chain fatty acid transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2031 Lipid transport and metabolism (I) I Short chain fatty acids transporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02106 short-chain fatty acids transporter Two-component system -

Protein Sequence

MIGRISRVMTRVVSRYLPDPLIFAMLLTMLTFIIALALTPSTPMDLVNLWGNGFWNLLAFGMQMALIIVTGHALASSPPVKRILRLTASLAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFMTWGGGFSGSMPLLAATPGNPVEHIAGLIPVSQTMFTGYNLFITLTLILVMPFVTRMMMPRKDDIMMIDPALLEEEPDFQKKLPEDAPVSLRMEESRLIAWIIGILGFTFLGMYFIKNGFNITINTVNMIFLLTGLLLHKTPMAYMRAVSAAARSTAGILVQFPFYAGIQLMMEGSGLGGLITEFFINVANKETFPLMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLLSAPIFIIGLAFF

Flanking regions ( +/- flanking 50bp)

GTGTCACCGGCAATCTGTGAAATGCCGCTGGTGACTGCGGGGGAAGCCGTATGATAGGACGCATCTCACGAGTCATGACCCGTGTGGTGAGCCGCTATCTGCCGGATCCGCTGATCTTCGCAATGCTGCTGACCATGCTGACGTTTATCATCGCGCTGGCACTCACACCAAGCACACCAATGGATCTGGTGAACTTATGGGGGAACGGATTCTGGAACCTGCTGGCGTTCGGGATGCAGATGGCGCTGATCATCGTGACCGGTCACGCGCTGGCCAGCTCCCCGCCGGTTAAACGTATTCTGCGGCTGACTGCCTCACTGGCAAAAACCCCGGTTCAGGGGGTGATGCTGGTGACGTTTTTCGGTTCGGTTGCCTGTGTCATTAACTGGGGATTCGGCCTGGTGGTCGGGGCGATGTTTGCCCGCGAAGTGGCCCGCCGTGTACCGGGCTCTGACTACCCGCTGCTGATCGCCTGTGCCTATATCGGGTTTATGACCTGGGGCGGCGGTTTCTCCGGCTCTATGCCGCTGCTGGCCGCCACACCGGGTAACCCTGTCGAGCATATCGCCGGGCTTATTCCTGTCAGCCAGACCATGTTCACCGGGTATAACCTGTTTATCACCCTGACACTGATTCTGGTGATGCCGTTTGTCACCCGCATGATGATGCCGCGCAAAGACGACATCATGATGATCGACCCTGCGCTGCTCGAAGAAGAGCCGGATTTCCAGAAAAAATTACCGGAAGACGCGCCGGTTTCTCTCCGGATGGAAGAAAGCCGCCTTATCGCATGGATTATCGGGATTCTGGGCTTCACGTTCCTCGGCATGTATTTCATCAAAAACGGTTTCAACATCACCATTAACACCGTGAATATGATTTTCCTGCTGACCGGTCTGCTGCTGCATAAAACCCCGATGGCGTATATGCGTGCCGTCAGTGCCGCCGCCCGCAGTACCGCCGGGATCCTCGTGCAGTTCCCGTTCTATGCCGGTATCCAGCTCATGATGGAAGGCTCCGGACTGGGCGGGCTTATCACTGAATTCTTTATCAACGTCGCCAACAAAGAAACCTTCCCGCTGATGACGTTCTTCAGCTCTGCGCTGATCAACTTTGCCGTGCCGTCAGGCGGCGGTCACTGGGTGATTCAGGGGCCGTTTGTTATTCCGGCTGCCCAGGCGCTGGGGGCTGATCTCGGTAAGTCCGTGATGGCGATTGCCTACGGTGAACAGTGGATGAACATGGCGCAGCCGTTCTGGGCGCTTCCTGCACTGGCGATCGCCGGGCTGGGGGTCAGGGACATTATGGGGTACTGCATCACCGCCCTGCTGCTCTCGGCACCGATTTTCATTATCGGCCTCGCTTTCTTCTGACAGATACTAAACAGTAAGGATTTCGCAATGGAAAATATCGTTATTGTCAG